Protein

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Genbank accession
ANT40742.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNLQTKVDNAIFDMGTVEKFTSGDEFSDVISRLGRKYSTLAKAIRMINILGEGRINDLLDDLKVRYYALSLRGPWSNNTQYELKDLVFVENITYICLISHTSSNSFQDDLDAGKWSVYQGATQVDLQSYVALNRTYPPVLESPVKFILNPSKASLIYGISDPTHLDDNLNNFRGINNPDAYHDSNVAIGAVSFGRNNPPIGYLSLSFGHDCVPFGVASIVGGAGSCTGNPDDPEGSRDAIYGYCSLSVGKDTQARGRISNAMGYLNLSESIYSSTDGYKCIAGASKTTDPDYLPDGTQGAAARAHGYQSEAYGNFAFSYGSFLLAFNGAQAIGKGIVKDGEVKPLKVSKRGLGLGYNVTRPTIFCKEGDGIDLERAWIGFNTDIPMSRYDYRYGESDTISHVIESTSGNGILANEVKGLLANGSYASLHNTIVSHPNAGQAYATIQHRLNGTEYMTVDQTRKVTFAKEIETSSGLYVAGDRVVGGQLPAILDLPASATLEDVIAKVNQILASLRGGTGHGLIAS
Physico‐chemical
properties
protein length:525 AA
molecular weight: 56511,46510 Da
isoelectric point:5,43247
aromaticity:0,09143
hydropathy:-0,21848

Domains

Domains [InterPro]
G3DSA:2.10.10.20
ATT
70–120
G3DSA:2.10.10.20 DC_2072
G3DSA:2.10.10.20
ATT
75–119
G3DSA:2.10.10.20
ANT40742.1
1 525
Architecture
ATT
STR
ATT 70-120 | STR 137-525
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANT40742.1
1 525
Domain Start End Length (AA) Confidence
N-terminal 1 180 180 0,7725
Central domain 181 385 206 0,5724
C-terminal 386 525 139 0,9498
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-180
Central
181-385
C-terminal
386-525

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaS_TRS1
[NCBI] 		1852629 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii A118
[NCBI] 		927193 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANT40742.1 [NCBI]
Genbank nucleotide accession
KX268652 [NCBI]
CDS location
range 20990 -> 22567
strand +
CDS
ATGTCAAATTTACAAACCAAAGTAGATAACGCAATTTTCGACATGGGTACTGTCGAAAAGTTCACGAGTGGCGATGAGTTTTCAGATGTCATTAGCCGGTTAGGCCGTAAATACTCAACTCTCGCAAAAGCAATAAGGATGATCAATATACTGGGGGAAGGTAGAATAAATGACCTACTAGATGATCTTAAAGTCCGATATTATGCATTATCATTACGTGGGCCTTGGTCTAACAATACCCAATATGAATTAAAAGATTTAGTTTTCGTTGAAAACATAACTTACATTTGTCTTATTTCGCACACTTCATCAAATAGCTTCCAGGATGACCTTGACGCTGGGAAATGGTCAGTTTATCAAGGTGCAACGCAAGTCGACTTACAATCTTACGTTGCATTAAACAGAACTTATCCTCCTGTTCTTGAGTCACCTGTCAAGTTCATTTTAAACCCATCTAAAGCAAGTTTAATCTATGGCATAAGTGATCCAACCCACTTAGATGACAATTTAAATAACTTCCGTGGCATTAATAATCCTGATGCATATCATGATTCAAATGTTGCAATTGGTGCTGTTTCATTTGGGCGCAACAATCCTCCAATCGGTTATTTATCTTTATCTTTTGGTCATGATTGTGTGCCTTTTGGCGTTGCATCAATTGTCGGTGGGGCAGGTTCTTGTACTGGTAATCCAGATGATCCAGAGGGATCACGAGATGCTATATATGGATATTGCTCTCTATCAGTAGGTAAAGACACTCAAGCCCGTGGTCGAATCTCTAATGCGATGGGTTATCTAAACTTATCAGAGAGTATTTACTCATCTACTGACGGTTATAAGTGTATTGCTGGTGCGTCAAAAACAACTGATCCTGACTATCTGCCGGATGGTACGCAGGGTGCTGCCGCACGAGCGCATGGTTATCAATCAGAAGCATATGGAAACTTTGCCTTCTCTTATGGTTCTTTCTTACTTGCTTTTAATGGCGCGCAAGCAATTGGTAAAGGTATCGTCAAAGACGGTGAGGTTAAGCCCCTTAAAGTCAGCAAGCGTGGGTTAGGTTTAGGCTACAATGTGACAAGGCCAACAATATTCTGTAAAGAAGGGGATGGTATTGATCTAGAACGAGCGTGGATAGGTTTTAATACCGATATTCCTATGTCTCGTTATGATTACAGATATGGTGAGTCAGACACGATTAGTCATGTAATTGAATCCACATCGGGTAATGGGATTCTTGCAAATGAAGTTAAAGGATTGTTAGCAAATGGTAGCTATGCAAGCCTACACAATACTATTGTTTCACATCCGAATGCTGGCCAAGCCTATGCAACTATTCAGCATCGTCTAAACGGTACTGAATATATGACTGTCGATCAGACAAGGAAGGTTACTTTTGCAAAAGAAATTGAGACTTCATCAGGTTTGTATGTGGCTGGGGACCGTGTCGTTGGCGGTCAGTTGCCAGCAATTCTGGACTTGCCTGCATCTGCAACTTTAGAAGATGTAATTGCAAAAGTTAATCAGATTCTGGCTTCGCTCAGAGGGGGGACGGGTCACGGCTTAATTGCATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fda81e9f23c2205273f4fe9ea370eb4a98db3816f7d722f942ab172336e60179
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7330
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of vB_AbaS_TRS1, a Viable Prophage Isolated from Acinetobacter baumannii Strain A118 Turner,D., Wand,M.E., Sutton,J.M., Centron,D., Kropinski,A.M. and Reynolds,D.M. 2016 27738026 GenBank