Protein

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Genbank accession

XYO02471.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MAIQNRPDEKIFASSAGSQEVSAFPNIEKGWGFTFEETGGIPTMEHFNALFKRIDEHFNYMLQRGLPEWSATLDYPAGAYVQYDNKTYRSKKASKNQRPDIVDSTYWVRWSIDYKEVSDFIDEAGKKGVPIGAVVAFPQEISNPQGFLLANGSTFNQQTYPDLYRTLGNKNKLPRLGKELQRGIKVAALSSSSTHQE

Physico‐chemical properties

protein length:	197 AA
molecular weight:	22238,60550 Da
isoelectric point:	6,85066
aromaticity:	0,12183
hydropathy:	-0,63198

Domains

Domains [InterPro]

DC_1934
STR
1–194

DC_1934

G3DSA:2.10.10.20
ATT
54–112

G3DSA:2.10.10.20 SSF88874

IPR036573
STR
66–108

IPR036573 IPR037053

cd12215
STR
67–100

cd12215 IPR011083

XYO02471.1

1 197

Architecture

STR

ATT

STR

ATT

STR

STR 1-53 | ATT 54-112 | STR 113-127 | ATT 128-182 | STR 183-194 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1934	STR	DC_1934	1	194	Novel HMM	DC_1934	Central	Low	Positional only	20 proteins / 20 hits
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	54	112	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
IPR036573	STR	IPR036573	66	108	Merged direct domain	Carbohydrate-binding module superfamily 5/12	Central	Low	Positional only	2 proteins / 2 hits
cd12215	STR	DC_0226	67	100	InterPro cluster	ChiC_BD	Central	Low	Positional only	1 proteins / 1 hits
SSF88874	STR	SSF88874	128	183	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	128	182	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	132	169	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pasteurella phage Pmp3 [NCBI]	3127679	Viruses >
Host	Pasteurella multocida [NCBI]	747	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Genbank protein accession

XYO02471.1 [NCBI]

Genbank nucleotide accession

OR544134.1 [NCBI]

CDS location

range 2718 -> 3311
strand -

CDS

ATGGCAATCCAAAACAGACCTGATGAGAAGATTTTTGCGAGTAGTGCTGGCTCACAAGAAGTTAGTGCATTTCCTAATATTGAAAAGGGGTGGGGGTTTACATTTGAAGAGACTGGCGGCATCCCGACAATGGAGCATTTTAATGCTTTATTTAAGCGCATTGATGAGCACTTTAATTATATGCTACAACGCGGCTTACCTGAGTGGTCGGCAACATTAGATTATCCTGCTGGTGCATACGTTCAATACGATAATAAAACTTATAGATCTAAAAAGGCGAGTAAAAATCAACGTCCGGATATTGTTGATTCTACTTACTGGGTGAGATGGTCAATTGATTATAAAGAGGTAAGTGATTTTATTGACGAGGCAGGAAAGAAAGGTGTACCGATAGGTGCAGTTGTCGCTTTTCCACAAGAAATCAGCAATCCACAAGGATTTCTGCTTGCAAATGGCTCTACATTTAACCAACAAACCTACCCTGATTTATACCGCACTTTAGGAAATAAAAATAAATTACCTAGATTGGGGAAGGAACTGCAGCGGGGAATAAAGGTGGCGGCACTCTCATCGAGTTCGACGCATCAAGAGTAG

Genome Context

Tertiary structure

PDB ID

463dba99a3d72c476558b66424f5262316753ceb4d59beebcb6b2a6bf8a7a8ec

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8715

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence