Protein

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Genbank accession
QWY83168.1 [GenBank]
Protein name
SGNH hydrolase-type protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MARSRFRQFKRFRQAVFNRPVVLNVAGSMWPMANVKSGTVGESCRIQYRNNSGHTLTDIFVDFGNWYNLVTGEVDNPNDISIECALEDASNNVFPLNMQGAARGVLAPGEDGTFSGFGMSIAPGALFWIRCDVEPAAGGTYPIAYLGAGTFTTTAKNREAYVSPTVMSYKARSGATISGVNNQQMFAPLAIRATTPNRFSFGAIGDSWIQGSGDGAQSSDFSQGIYGRACAVTGGAGVPYMQIGYAGAKVKDHHTLAKCQRRIRMMARALSHCAIEYGINDVVDSGTTLAAIKADLLALATLIKDAGVKPIAHTIGPRTGSTDTWDTVANQTPSASYIAGTNGVTGANSTVTQELNDWLRTIPAPFHDVFDCADAVMSARNSGRWAINAAWTPPRYVADGVHPARTGTATGGVFAGRDALLTKVQLWQSQVN
Physico‐chemical
properties
protein length:432 AA
molecular weight: 46013,30310 Da
isoelectric point:8,79086
aromaticity:0,09028
hydropathy:-0,11991

Domains

Domains [InterPro]
IPR036514
STR
185–405
IPR036514
IPR036514
STR
190–410
IPR036514
SSF52266
STR
202–407
SSF52266
cd00229
ENZ
203–407
cd00229
QWY83168.1
1 432
Architecture
STR
STR 185-410 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY83168.1
1 432
Domain Start End Length (AA) Confidence
N-terminal 1 333 333 0,0091
Central domain 334 421 89 0,1429
C-terminal 422 432 10 0,9883
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-333
Central
334-421
C-terminal
422-432

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X2_24
[NCBI] 		2836082 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY83168.1 [NCBI]
Genbank nucleotide accession
MW960031 [NCBI]
CDS location
range 33542 -> 34840
strand -
CDS
ATGGCGCGTTCTCGGTTTCGTCAATTCAAGCGTTTCCGTCAAGCCGTTTTTAACCGTCCTGTTGTGCTTAACGTTGCCGGTTCAATGTGGCCAATGGCTAACGTGAAATCCGGAACGGTTGGTGAAAGTTGCCGTATTCAGTACCGCAACAACTCCGGTCATACTCTCACCGATATATTCGTTGATTTCGGCAACTGGTATAATCTAGTTACCGGTGAGGTTGATAACCCAAACGATATTTCGATTGAATGCGCGCTTGAGGACGCCAGCAATAACGTTTTCCCGCTCAATATGCAGGGTGCAGCGCGCGGCGTCCTTGCTCCTGGTGAAGACGGAACGTTTAGCGGTTTCGGAATGTCAATTGCGCCCGGTGCGCTTTTCTGGATTAGGTGCGACGTTGAACCTGCTGCGGGCGGTACTTATCCTATTGCTTATCTTGGCGCGGGAACGTTTACGACAACTGCGAAGAACCGCGAAGCGTATGTTTCACCAACGGTAATGAGTTATAAAGCACGCTCCGGTGCAACGATTTCTGGCGTCAACAACCAACAAATGTTCGCGCCGCTAGCAATTCGAGCAACGACGCCGAACCGGTTTAGCTTTGGCGCAATTGGCGATAGCTGGATACAGGGCAGCGGTGACGGCGCGCAATCGTCTGATTTCAGTCAAGGTATTTACGGACGTGCTTGCGCTGTTACTGGCGGCGCTGGCGTCCCGTATATGCAAATCGGTTATGCCGGTGCGAAAGTGAAGGATCACCACACGCTAGCGAAATGTCAGCGGCGAATTCGCATGATGGCGCGGGCGTTGTCGCATTGCGCTATTGAATACGGAATTAACGACGTAGTTGATAGCGGAACAACTCTCGCTGCAATCAAAGCGGATTTGTTGGCACTCGCAACGCTGATAAAGGACGCTGGTGTTAAACCGATTGCGCACACGATAGGACCGCGCACCGGATCAACTGATACATGGGATACCGTCGCCAATCAAACGCCGTCCGCAAGCTATATTGCCGGAACGAATGGCGTTACAGGTGCGAACAGTACAGTGACGCAAGAATTGAACGATTGGCTACGCACTATTCCCGCACCGTTCCATGATGTATTTGATTGCGCCGACGCGGTAATGAGTGCTAGAAACAGTGGACGTTGGGCGATTAACGCAGCCTGGACGCCACCGCGATATGTTGCGGACGGCGTACACCCGGCACGCACCGGAACAGCGACGGGCGGTGTATTTGCTGGACGTGATGCATTGTTGACCAAAGTGCAGTTGTGGCAATCTCAAGTAAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b509addec0f936104778b8148b532421e2884a49f34af9a1c1fecb178d1ccd0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7922
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Juarez,S. 2017-09-25 — GenBank