Protein

View in Explore
Genbank accession
XCO39840.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALYRQGKAAMDANGVITGTGTKWQSALSLIRPGSTIMFLSSPIQMAVINKVVSDTQINAITTNGAVVPSSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIAEAVEFFKDFDLNALQELADQVRADAEASATNAAAAAASEGAAKTSETNSKASEQAALTARQQAGSARDQTQALYNQTVDLVAGVQAPDKLPTSPGSSRAWMKIANVKNAGQSNCFAQFIIGGGANFGSVNLPIDIFSISGRGLPDTLTSNNIDANFTQCALIPASNSTSRLKLGVVKNTDGSFDVYLLSPNGYFPVMWLNRLNVQSNNGLITGPIIDRTGYSWITTEPAGIVYNSPSDYLMANDSTIPRTNVANTFSQPQAISVPGGNATLTLNGAVVRANNNNAIVCSIPEDGQGMYFRPNGDMNNAKQVVFDAANFTVTGLNATFSNSVTMLSTLRVNGASNLRGGVDVTASQKLPLKETTATTGIGVNFIGDNATECSFGIENTAGGSAVFHNYARGASNSVTKNNQLLGGYGSRPWLGSDYTEHSNAALHFLGAGDTSGTNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWLVPDGSMHPDLGLVRSFETLNAVVPAFNAPTKQDGRGLKIVGGEAPEINMIAPRGSATSSPAVRAMWCDGSLSDTTRYIGAAQPGSTFYIGASGYDGEKFDSMRGSVSIKAAAGWGKTSTPTQVVFETCETGSIVRTPRWMVDHNGTLTPSADNRYNLGWGSGRAMNIYAVNGTINTSDARLKNDVRMMADPETEAAKEIAKEIGFWTWKEQADMNDVREHCGLTVQRAMEIMESHGLKPFDYAFICYDKWEETTVVDHYGPAKEDGTENPIYKTIPAGDRYSFRLDELNMFIAKGFEARLSAIEEKLGM
Physico‐chemical
properties
protein length:892 AA
molecular weight: 95182,25980 Da
isoelectric point:5,13912
aromaticity:0,07848
hydropathy:-0,22915

Domains

Domains [InterPro]
DC_0313
STR
1–890
DC_0313
IPR036388
RBD
746–892
IPR036388
cd10144
CHP
760–882
cd10144
IPR030392
CHP
760–820
IPR030392
IPR030392
CHP
760–890
IPR030392
XCO39840.1
1 892
Architecture
STR
STR 1-892
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39840.1
1 892
Domain Start End Length (AA) Confidence
N-terminal 1 244 244 0,7688
Central domain 245 443 200 0,5886
C-terminal 444 892 448 0,8902
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-244
Central
245-443
C-terminal
444-892

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146036
[NCBI] 		3232216 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39840.1 [NCBI]
Genbank nucleotide accession
PP889486.1 [NCBI]
CDS location
range 20778 -> 23456
strand -
CDS
ATGGCACTATACAGACAAGGCAAAGCCGCGATGGACGCAAACGGCGTTATCACCGGGACTGGCACGAAGTGGCAATCAGCCTTATCGCTCATTCGCCCAGGCTCAACAATCATGTTTTTATCGTCGCCGATTCAGATGGCGGTGATTAACAAGGTTGTCAGTGATACGCAAATTAACGCCATCACCACAAACGGCGCGGTTGTCCCGTCCAGCGATTACGCGATCCTTTTAAGCGACTCGCTGACCGTTGACGGCCTGGCGCAAGATGTTGCTGAAACGCTGCGCTACTATCAATCGCAAGAAACTGTTATTGCTGAAGCGGTAGAATTCTTTAAAGATTTCGATCTCAATGCTTTGCAGGAATTGGCCGATCAGGTTAGGGCGGACGCAGAAGCATCGGCGACAAACGCAGCGGCGGCTGCTGCGTCAGAAGGGGCGGCGAAAACTTCAGAAACTAACTCTAAGGCATCGGAGCAAGCGGCGCTAACAGCACGACAACAAGCCGGGTCGGCAAGGGATCAGACGCAGGCGCTGTACAACCAGACTGTCGATCTTGTGGCTGGAGTTCAAGCGCCGGATAAGCTGCCAACCTCGCCAGGTAGCTCGCGGGCGTGGATGAAGATTGCCAACGTTAAGAACGCTGGACAGTCAAACTGTTTTGCGCAATTTATTATTGGTGGCGGCGCTAACTTCGGTTCGGTGAATCTCCCGATCGATATCTTTTCTATTTCTGGCCGTGGTCTTCCTGATACGCTAACCAGTAATAATATTGACGCCAACTTTACTCAATGCGCACTCATTCCGGCATCAAATAGCACGTCACGTTTGAAGTTGGGGGTTGTGAAAAACACTGACGGATCTTTTGATGTTTATTTGCTATCGCCTAACGGTTACTTTCCCGTTATGTGGTTAAACCGTTTGAACGTGCAATCTAATAATGGGTTGATTACCGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAGCCGGGATTGTATATAATTCGCCATCTGATTATTTGATGGCTAACGATAGCACGATCCCGCGCACCAACGTAGCTAACACGTTCAGCCAGCCGCAAGCGATCTCCGTCCCAGGTGGTAACGCTACGCTGACCCTGAACGGTGCCGTAGTTAGAGCCAATAACAATAACGCGATCGTTTGCTCCATCCCGGAAGACGGTCAAGGCATGTACTTCCGCCCGAATGGCGATATGAACAACGCGAAGCAGGTTGTTTTTGATGCGGCAAACTTTACCGTTACCGGGTTGAATGCCACTTTCAGCAATTCGGTTACGATGTTAAGCACGCTCCGCGTCAATGGTGCATCTAACCTTCGCGGCGGTGTTGATGTTACCGCGTCGCAGAAATTGCCACTGAAGGAAACGACCGCAACAACCGGGATTGGCGTAAACTTCATTGGTGACAACGCAACTGAATGCTCTTTCGGCATTGAAAACACCGCTGGCGGTTCCGCTGTGTTTCATAACTATGCTCGCGGGGCGTCCAATAGCGTAACTAAGAACAATCAGCTTTTAGGTGGTTATGGTTCTCGCCCGTGGTTAGGATCTGACTACACGGAGCACAGTAACGCGGCCTTGCATTTCCTTGGCGCTGGCGATACATCTGGAACCAATCACGGCGGCTGGATTCGCTTGCTTGTAACCCCTAAAGGTAAGACGATTAGCGATAGGGTTCCGGCGTTCAGGCTGTCGGATAATGGCGATCTTTGGCTGGTTCCAGACGGCTCTATGCACCCGGATCTTGGGCTTGTGCGTAGCTTTGAGACGTTGAACGCAGTCGTTCCGGCGTTTAATGCTCCGACTAAACAGGACGGGCGAGGGTTGAAAATTGTAGGAGGCGAAGCTCCTGAAATTAACATGATCGCCCCGCGTGGTTCCGCCACATCATCGCCAGCAGTTCGTGCTATGTGGTGCGACGGTAGCCTTTCCGATACCACAAGATACATTGGTGCGGCACAGCCAGGATCTACTTTCTACATCGGCGCGTCCGGTTATGATGGCGAGAAATTTGATTCAATGAGGGGTTCAGTTTCCATTAAAGCCGCTGCTGGGTGGGGTAAAACATCAACTCCAACGCAAGTTGTATTTGAAACGTGCGAAACAGGATCGATTGTCCGAACTCCTCGCTGGATGGTTGACCACAACGGTACGCTTACGCCATCTGCGGATAACAGATACAATTTAGGCTGGGGATCTGGCCGGGCAATGAACATTTACGCCGTAAACGGAACAATCAACACTTCCGATGCACGGTTGAAAAATGACGTTCGAATGATGGCGGATCCTGAAACGGAAGCGGCGAAGGAAATTGCGAAGGAGATCGGTTTTTGGACGTGGAAGGAGCAAGCGGATATGAACGACGTCCGCGAGCACTGCGGGTTAACGGTTCAGCGCGCAATGGAGATTATGGAAAGTCACGGATTAAAGCCTTTCGATTACGCTTTCATCTGTTACGACAAGTGGGAAGAAACAACCGTTGTTGACCACTACGGCCCGGCGAAAGAGGACGGAACAGAGAACCCGATCTACAAAACCATCCCGGCTGGCGATCGCTATTCGTTCCGACTCGACGAACTTAACATGTTTATCGCGAAGGGATTCGAAGCGCGGCTATCAGCCATTGAGGAGAAACTTGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2a7e5add4d6cb8fe94efbfce7a55932cb13c5373a8864d5e08c702251cdf860
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6351
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank