Protein

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Genbank accession
WCD44169.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPFEKFVVVRPGLSGSAHKLVTNTRDASTGEKIVGIYTYFDRNEMEKPYPITTTNWEVRMSPAQVREALLAGNWDEDEALERWIIANVDKYMGATMIGAPTEEETLANSQAKALAALTADYVAAMKTLSGVYSNAEQKTWRAQVDEALAYTSDASAPTPWIDQAIAGNGRDKAEYAAAILGNNTMFTEESGRLTGILQGARGKIQEATDPAEVVAVTWNFSQPIQSTMIAPSPSPAVTPVAQ
Physico‐chemical
properties
protein length:242 AA
molecular weight: 26208,11290 Da
isoelectric point:4,69026
aromaticity:0,07851
hydropathy:-0,27851

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xylophilus phage Lumi
[NCBI] 		3017788 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xylophilus sp.
[NCBI] 		2653893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD44169.1 [NCBI]
Genbank nucleotide accession
OQ067477.1 [NCBI]
CDS location
range 37117 -> 37845
strand +
CDS
ATGCCTTTCGAGAAATTTGTCGTCGTCCGTCCCGGCCTGTCTGGCTCTGCCCACAAGCTGGTCACGAACACCCGTGATGCCAGCACGGGTGAAAAGATCGTGGGTATCTATACCTACTTCGACCGCAACGAGATGGAGAAGCCATACCCCATCACGACCACCAACTGGGAAGTTCGCATGTCGCCTGCCCAGGTGCGTGAAGCGCTGCTGGCTGGCAACTGGGACGAGGACGAAGCCCTGGAGCGTTGGATCATCGCCAACGTGGACAAGTACATGGGCGCTACCATGATCGGTGCCCCGACCGAGGAAGAGACCCTGGCAAACTCCCAGGCCAAGGCCCTGGCTGCACTGACCGCCGACTACGTGGCCGCGATGAAGACCCTGAGCGGTGTGTACTCCAACGCCGAGCAAAAGACTTGGAGGGCTCAGGTGGACGAAGCCCTGGCCTACACCTCTGACGCCAGCGCCCCCACCCCCTGGATCGACCAAGCCATTGCTGGCAATGGCCGCGACAAGGCCGAGTACGCTGCTGCCATCCTCGGCAACAACACCATGTTCACCGAGGAGTCGGGTCGTCTGACCGGCATCCTGCAAGGTGCTCGTGGCAAGATCCAGGAGGCAACCGACCCGGCTGAAGTCGTGGCTGTGACCTGGAACTTTTCCCAGCCGATCCAGTCCACCATGATCGCCCCCAGCCCCTCCCCGGCTGTGACGCCCGTGGCTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
727d78f1abf0c3c896cf367e010d194a8c28b6bf07dc501101e25a6f2d9bac97
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three Phages from a Boreal Lake during Ice Cover Infecting Xylophilus, Caulobacter, and Polaromonas Species Laanto,E. and Oksanen,H.M. 2023 — GenBank