Protein

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UniProt accession
A0A8S5VQB3 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MAFREILPADLSGKGNVGKPDTPGYSTAEMQRVMDEIPREVIVPIFNQLVTALNEMALENRTHNEGGCLYIRLNDDKVLETSNDGKTWQATGSSGHLILDDGGEEMPQRSRMQFMGATVTDNGGVTQIALRKGDTGAQGPQGPVGPQGPAGAQGNIGPMGPQGIQGPRGVQGLTGAQGPTGATGPTGPQGPKGEKGADGTSFVVLGRYDRLTLLEAAHPAGNKGDAYAVGSETDNVVYLWDVDAKKWNPIGSLQGPQGPQGPQGPQGATGETGPAGPQGEVGQEGPQGIQGKKGETGERGPQGIQGLTGEQGPIGATGPQGEKGDPGVIQNVNGKTGESVWLNAEDVGAENAHSYKTVTVAASAWTSGDYSVTWDDGTSTSYTQCATVTVSGVTADSHISVSDRTRVTDAVRMIAALEPGAGVVKFYANAAPTSAAVFVLEVSQ
Physico‐chemical
properties
protein length:444 AA
molecular weight: 45510,63050 Da
isoelectric point:4,70902
aromaticity:0,04730
hydropathy:-0,48131

Domains

Domains [InterPro]
DC_0575
ATT
1–135
DC_0575 DC_2298 IPR008160 DC_1264
IPR050149
Unmapped
131–336
IPR050149
IPR008160
STR
136–194
IPR008160
G3DSA:1.20.5.320
STR
172–214
G3DSA:1.20.5.320
DC_1065
STR
192–300
DC_1065
A0A8S5VQB3
1 444
Architecture
ATT
STR
RBD
ATT 1-135 | STR 136-306 | RBD 350-444
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ackermannviridae sp
[NCBI] 		2831612 Uroviricota > Caudoviricetes > Pantevenvirales >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG95200.1 [NCBI]
Genbank nucleotide accession
BK035353 [NCBI]
CDS location
range 11007 -> 12341
strand +
CDS
ATGGCATTCAGAGAAATATTACCCGCCGATTTGAGCGGCAAGGGCAACGTTGGCAAACCGGACACACCGGGATACAGCACGGCAGAGATGCAGCGGGTCATGGACGAAATACCGCGAGAAGTCATTGTGCCGATTTTCAACCAGCTTGTGACGGCCCTGAACGAAATGGCACTGGAAAACCGCACCCACAATGAGGGCGGCTGCCTGTATATCCGGCTGAACGACGATAAAGTCCTTGAGACGAGCAACGACGGCAAGACCTGGCAAGCTACCGGCAGCAGCGGCCATTTGATACTGGACGATGGCGGCGAGGAAATGCCGCAGCGTAGCCGGATGCAGTTTATGGGCGCGACCGTGACGGACAATGGCGGCGTGACACAGATAGCACTGCGCAAAGGTGATACCGGCGCACAAGGCCCGCAAGGCCCGGTAGGCCCGCAGGGGCCAGCGGGTGCACAGGGCAATATTGGCCCCATGGGGCCGCAGGGCATTCAAGGCCCGCGCGGTGTGCAGGGGTTGACCGGCGCACAAGGGCCGACCGGCGCAACAGGCCCGACAGGCCCGCAGGGGCCGAAGGGTGAGAAGGGCGCAGACGGCACGAGCTTTGTTGTGCTGGGGCGCTATGACAGACTGACCCTTTTGGAAGCAGCGCACCCCGCCGGCAATAAGGGCGATGCCTACGCCGTTGGCAGTGAGACCGACAACGTTGTGTACCTTTGGGATGTGGATGCCAAGAAATGGAACCCAATCGGCAGTTTGCAAGGCCCGCAGGGGCCGCAGGGACCGCAGGGGCCGCAAGGCGCTACCGGAGAGACAGGCCCCGCTGGCCCGCAGGGTGAAGTTGGCCAGGAAGGGCCGCAGGGCATCCAGGGAAAAAAGGGAGAAACCGGTGAGCGAGGGCCGCAGGGCATCCAGGGCTTGACAGGTGAGCAAGGTCCAATCGGCGCGACAGGCCCGCAGGGTGAGAAAGGCGACCCGGGTGTTATCCAGAACGTGAACGGCAAGACCGGGGAATCGGTATGGCTGAATGCGGAGGATGTGGGAGCAGAAAACGCGCATAGCTACAAGACCGTAACGGTGGCGGCATCGGCCTGGACTTCCGGCGATTATAGCGTGACGTGGGACGACGGAACCAGCACGAGTTATACGCAGTGCGCCACCGTCACAGTTTCCGGCGTGACGGCAGACAGTCATATCTCCGTATCTGACCGCACGAGAGTGACGGATGCGGTGCGGATGATAGCCGCGCTGGAACCCGGGGCCGGTGTTGTTAAGTTTTATGCGAACGCGGCGCCGACGAGCGCGGCGGTGTTTGTTTTGGAGGTGAGTCAGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
f8ee9daf493d997dda5bc9ce41941704131694e45643e791df8a4185ef3c94ce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6544
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50