Protein

View in Explore
Genbank accession
WPJ20732.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISISVNGRVLGEDDELSFCLRDGDVVNVYCQPSGVIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELDTDPPPVVIETATTTTVTETEFAGGQIAVKIPKNSAFDYFVDLTMPHDVVFKLNITYAQGGGASVTENVTLSGRLVSATETDDGGLPPVNYWYTFIINNINYSGAPISSLNGVTINNTYFNLTDNQPIVSGPYFSPIDGDQLWVHLQHQTNDGNDFSVLIEWWKIDEDNVQIPGTYQSMNYYQDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSILQLEEIHSIVTRTNVSYPDDTVVKVIVRATENATGSRDRKYNALITRHAIGYNRDTGTVRYTLAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITGSGIVEGEPTKAKKFDMLYVRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIESRNGSVFTTSEQLTADDNLYVVITSSDGSVSDRLPATVTGLYTFTCNLPSDFQLNIWDGTNVQSESRYVLSTERELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYTIPSS
Physico‐chemical
properties
protein length:828 AA
molecular weight: 92373,47890 Da
isoelectric point:4,54106
aromaticity:0,10386
hydropathy:-0,38599

Domains

Domains [InterPro]
DC_0118
STR
1–669
DC_0118 DC_0808
NF040662
Unmapped
356–822
NF040662
WPJ20732.1
1 828
Architecture
STR
RBD
STR 1-669 | RBD 686-827 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_AB4P2
[NCBI] 		3076812 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ20732.1 [NCBI]
Genbank nucleotide accession
OR544125 [NCBI]
CDS location
range 28576 -> 31062
strand +
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCAGGCACGCCGAAAGAAACGGGAATTGTGCCAGCTGGCACTAACCTGTGGAAGTGGCTGAATAAATCAAACCTACCAGCCAGCATTTCAATTTCGGTAAACGGCAGAGTGCTTGGTGAAGATGATGAGCTTTCCTTCTGCTTGCGAGATGGCGATGTTGTCAACGTTTATTGCCAGCCATCCGGCGTAATTGGCGATCTTATCGGTGCGATACTGAAGCCAGTAACGAAGATTTTCTCCTTCCTTACGCCGAAGGTATCCACACCCAAAACGGATACCAGCTCAAAAACATCACCAAATACCAGCCTGAAAGCGCAGACGAACATTGCGCGCAACGGAGAGGCGCGACCTGATAACTTCGGGCAGATTCGTGCGTTTCCTGATTTGCTTCAGGAATCATTATTCGAATATATCAATAATATTAAGTACGTCACCGAGTTCATGAATTTTGGCCTCGGCAAATATGATGTTTCCTCTGTGCGTTACTCGGAATCAAATCTTGGTTCACTGGCTGGAGCGAGTTACACCATTTATCAGCCAGGAGAAGTTATTCCGGTTGTGTATGAGCCTTATGCTTTTGATGATGTTGACGGTCAGGAACTGTATGGACCAAACGAACTGGATACTGACCCACCGCCAGTGGTTATTGAAACTGCAACAACAACCACGGTCACAGAAACAGAATTTGCTGGAGGTCAGATTGCTGTCAAAATACCGAAAAACTCAGCATTCGATTATTTCGTTGACCTAACCATGCCTCATGATGTGGTATTCAAGCTGAATATAACTTATGCGCAAGGTGGTGGCGCATCTGTCACCGAAAACGTTACGCTATCAGGAAGACTTGTATCTGCAACCGAGACTGATGATGGTGGGTTGCCGCCAGTAAACTACTGGTACACGTTTATTATTAACAACATCAACTACTCAGGCGCGCCAATATCATCCCTGAATGGCGTGACGATTAATAACACCTATTTCAACCTGACAGATAACCAGCCGATTGTTTCTGGTCCGTACTTTTCGCCGATTGATGGTGATCAGCTTTGGGTGCATCTGCAACACCAGACCAATGATGGCAATGATTTCAGTGTACTCATTGAATGGTGGAAGATTGACGAAGATAACGTTCAGATTCCCGGAACGTATCAGTCGATGAACTATTATCAGGACGTGGACAGAAACGATACATTCTACTACACGATCAAGTTAACCCCATCTGCTGGCACTGGTCGCTACGCGATTCAGATGCGACGGACAAATAACAGTTCAGACACGTCAATACTTCAGCTTGAGGAAATTCACTCAATCGTCACGCGCACCAATGTTTCGTATCCAGACGACACAGTAGTTAAGGTTATCGTACGCGCCACAGAAAACGCAACAGGCAGCCGAGACAGGAAATATAATGCATTAATCACGCGTCATGCCATCGGATACAACCGTGATACTGGCACGGTGCGCTACACACTTGCGCCATCACGCAGCTTTGCTGATGCTGTGCTGCACAACTGGCTGATTACAGCTGGCAATCCAGAAAACACGATTGATATTGTGAAGCTGTATGAAATTGCCGACAGCCTGCCTGATGAGCGATTGGGTTATTTCGATTACACGTTTGACGATGAGGATAAGAGTATCGGCGAACGCCTGCAAACAATCTGTGATGCAGCTCGTGTCACTGCGTTTTGGGATGATGGCGTGATGAGCTTCTCCCGTGATGAAAAGCGAGAATATCCGGCAACTGTATTCAACACCAGAAACACGCAGAGCGACGGGTACAAGCTGAGTTATGACATTAGTCTTCCCGGCACTTATGATGGCGTTAACGTCGAATATCGCGACCCAACAACGAATAAGCAGGCCAACGTTTACTATCGCATCACTGGCAGTGGAATTGTCGAAGGAGAGCCAACGAAAGCCAAGAAATTCGACATGCTTTATGTTCGCAATCGCTATCAGGCTGTTGACAGGGCAATCCTTGAATGTCGCAGACTAATTTATTCTCGTCGCAGCATGGAAATTAAAGCACTTGCTGATGGCGAATGGGTTAACGTTGGAGATATGATTCAGGTCGTCGATATGTATGATGATGTGCAACAGACCGGGGTTATTGAATCGCGCAATGGAAGCGTGTTCACAACAAGCGAGCAATTAACTGCTGATGATAATCTTTATGTTGTGATCACCAGTTCTGACGGCAGCGTATCAGACAGATTGCCAGCGACGGTAACCGGATTGTATACATTCACATGCAATTTGCCATCTGATTTCCAGTTGAATATATGGGATGGCACGAACGTGCAATCCGAATCTCGTTACGTGCTGAGCACTGAGAGAGAGCTTGATACTACGTTATGGGTGGTCAGTCAGAAGAATCCCGGCAGCGACGGGACAACAACTCTGACCATGAGTGAATACAGCGATGATATGTACGAATATACCATTCCGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
727c0b0f229675bd5c35ad248caa1a8acfd8c84122f5cf7c0aee2ce48ecdaa4a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2993
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The biological characteristics and genomic analysis of a novel Acinetobacter baumannii phage vB_AbaM_AB4P2 Tan,Y. 2023-05-11 — GenBank