Protein

View in Explore
Genbank accession
AGH07530.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MAKQQIGVGSASNDGTGDTLRQGAVKVNANFSEIYSVFGDATNLVSFAKTSGISSDSNKFGGQIPSFYQDATNLTSGLLSPDRLPEVVVATAFSGGLIGSVTGNVTGDLTGTASTSVNAAVAYAVTGQPDLLARDIVAVSIACTNVIGDLTGAAAYAQTSGLSNYSFVSGLSTNSQRSVYSQLSGVSTVSGYATTAGIATLAVNSQGLTGSPDIVVGLASGTFKGDGSQLTGVVAASSGILIRDNDTPIGIAASVNFGYGATVSPLSAGIVTVTAVTQYDQLEISGVSTFTGDIKPNGNITGDGNTVITGVSSAYITDLHGGLIGNVITAAQPNITSLGTLTSLNVSGDVSIGGTLTYEDVTNIDSVGLITARSGMVATGVVTATAFSGPLIGNADTATSSGTATTATRANNIAVVDESTDTTCSVLYTNAASGYQAAKTGTNLLFDAVQGTLKPTNINATGIITASSFSGNATSATQATTANVASAVLLSDESSDTTCYPTFANSGIGTQSLKTGSNLYFNSNSGQLYATQFSGSGAGLSNIPASAITGLNVDTRPNFQTAEYSTKTTFDFTHNYTSVPNMSCTITPTNSNSKILIQVLIMGWASGGKYDTVWGIQRSISGGSTNDLTYPNDGLRQGSMYYETDTTQNYQAHCFQYWYVDTPGTTAAITYTPRIRNGYTAGTRTFYFNRDFGYFNYQSYRVGGSRMSVMEVQP
Physico‐chemical
properties
protein length:714 AA
molecular weight: 73132,59900 Da
isoelectric point:4,51946
aromaticity:0,08123
hydropathy:0,02199

Domains

Domains [InterPro]
IPR036240
STR
1–42
IPR036240 DC_1345 DC_1875
DC_0533
ATT
1–57
DC_0533 DC_0759
IPR008987
ATT
3–43
IPR008987
G3DSA:1.20.5.960
Unmapped
13–44
G3DSA:1.20.5.960
AGH07530.1
1 714
Architecture
ATT
STR
STR
ATT 1-57 | STR 80-453 | STR 459-663 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM6a
[NCBI] 		682650 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07530.1 [NCBI]
Genbank nucleotide accession
HQ317391.1 [NCBI]
CDS location
range 63763 -> 65907
strand +
CDS
ATGGCTAAGCAACAAATTGGTGTGGGTTCTGCCAGTAATGATGGAACAGGAGACACCCTGCGACAAGGAGCAGTAAAGGTAAACGCAAACTTTAGCGAGATATACTCGGTATTTGGTGATGCGACTAATTTGGTAAGCTTTGCCAAGACTTCTGGTATCTCCAGTGACTCTAATAAGTTTGGTGGTCAGATACCTTCTTTCTATCAGGATGCAACTAATTTAACCTCTGGTTTACTTTCACCCGATCGTTTACCAGAGGTTGTTGTAGCGACTGCTTTTAGTGGTGGGTTGATAGGAAGTGTAACTGGTAACGTTACAGGTGATCTCACTGGTACTGCATCTACATCTGTCAATGCTGCGGTTGCATATGCCGTAACTGGACAACCAGATCTCTTAGCAAGGGATATAGTTGCAGTCAGTATTGCTTGTACTAACGTTATAGGTGATCTTACTGGGGCTGCAGCGTATGCTCAGACCTCTGGACTTTCAAACTATTCTTTTGTATCTGGTCTTTCTACAAACTCTCAGAGATCAGTATATTCTCAACTCTCTGGTGTATCTACTGTATCTGGTTATGCAACTACTGCTGGTATCGCCACTCTTGCAGTCAACTCTCAAGGTCTAACTGGATCACCTGATATTGTTGTTGGTCTTGCTAGTGGAACGTTTAAGGGTGATGGATCTCAACTGACTGGAGTTGTTGCTGCATCTTCTGGTATCCTTATTAGGGATAACGATACTCCTATTGGTATTGCTGCTAGTGTTAATTTTGGATATGGTGCAACAGTATCACCTTTATCTGCTGGTATTGTTACCGTAACTGCTGTCACCCAATACGATCAATTAGAAATTTCTGGTGTCTCAACCTTTACTGGAGACATCAAACCAAATGGAAACATTACAGGTGATGGCAACACAGTTATAACTGGTGTATCATCGGCTTACATCACTGATCTTCATGGTGGATTGATTGGAAATGTAATCACCGCAGCACAACCAAACATCACATCACTAGGTACTCTAACTTCATTGAATGTTAGTGGTGACGTAAGTATTGGTGGAACATTAACATACGAAGATGTAACTAATATTGATTCTGTTGGTTTGATCACCGCAAGATCTGGTATGGTTGCAACTGGTGTCGTAACTGCGACAGCATTTAGTGGACCTTTGATCGGAAATGCAGACACTGCCACTAGTTCTGGAACTGCAACTACGGCGACCAGAGCAAATAACATTGCAGTTGTCGATGAATCTACAGATACAACATGTAGTGTGTTGTATACTAATGCTGCCTCAGGTTATCAGGCTGCCAAAACAGGAACTAACTTACTGTTTGATGCAGTACAGGGAACTCTAAAACCAACTAATATTAACGCAACTGGTATTATAACTGCTAGTTCATTTAGTGGTAATGCTACGAGTGCCACTCAAGCTACCACTGCAAATGTAGCATCTGCTGTTCTCTTAAGTGATGAATCCTCAGACACTACTTGTTATCCTACATTTGCTAACTCAGGAATAGGTACACAGTCATTGAAGACTGGATCTAATTTATATTTCAATTCTAATTCGGGTCAGTTATACGCTACACAATTCAGTGGTTCTGGAGCGGGTCTTTCTAATATACCAGCATCTGCTATTACTGGTCTTAATGTTGATACTAGACCAAACTTCCAGACAGCAGAATATAGCACAAAAACTACTTTTGATTTTACTCATAATTATACATCAGTGCCTAATATGTCTTGCACTATTACTCCTACTAATTCAAATAGTAAGATTCTCATACAGGTTCTGATAATGGGTTGGGCATCAGGCGGTAAATATGATACTGTGTGGGGAATCCAAAGATCAATATCTGGTGGGTCTACAAACGATTTAACCTATCCAAATGACGGTCTCAGGCAAGGAAGTATGTATTATGAAACTGACACCACTCAAAACTATCAGGCACATTGTTTCCAGTACTGGTATGTGGATACTCCTGGCACGACAGCTGCAATAACATATACTCCAAGAATTAGAAATGGATATACTGCTGGAACCAGAACCTTCTATTTTAACAGGGATTTTGGATATTTTAATTATCAAAGTTATAGAGTAGGTGGTAGTAGAATGTCAGTAATGGAGGTACAACCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f18709f017bce6671d6ffd07291fa14456b9f0ebc9b77b84215fbf1c58431e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5747
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM6a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank