Protein

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Genbank accession
YP_010582014.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNSNYMYFVDFEKFGIRSDGTEARATTDGWIAALKEAVELGYHTVYVPEGLYLIDAVSTVGSLPEYGGGLMFPSNIEVIFHERALFQVAPNSSTGYACFNLENVENVTLRGGTIIGDRYEHDYVTDGVPDKRKTHEWGHGIHIRGCRNITVENATVMNCTGDNIWVPSKGMMNWEDSTYIPSEGITIRKCILIRGRRNNLATNGCLGMNVDDCDFIEAGGDTIGPAFGIDLEGFAENSIKYDHPYEINITNCRFKRNGKGALNINVTGKVHATNNFSDDVFNYGFSTDSTISNNTITNETGIDKPYGIDSIRKSSSETGNRTIITGNQIRGFATGICARGVGVIVSQNYLEDISSVGINPYLSEDVMVANNTINSDCLHIWVRNSVDVQVGNNKGKGAENYYGIKVEDSSDVVVNDNKHVAKGGIQVARSTNVRIKDNDLTLIGNGNGISWDKTSQVKLVKSNWISGAVAAAISGYADAYSTIISYNILEDCKYLIAIYLNGGAHHMLKGNDIMFRRGANGGYGVQLVNTTQARLISNDVRTMDGCTLHASYDSTGSTYTKYAYNTYIGKINLGQADTENYNTKLD
Physico‐chemical
properties
protein length:587 AA
molecular weight: 64210,83190 Da
isoelectric point:5,38495
aromaticity:0,09029
hydropathy:-0,31278

Domains

Domains [InterPro]
IPR012334
STR
13–337
IPR012334 DC_0453
IPR011050
STR
33–376
IPR011050 IPR011050
IPR006626
Unmapped
105–146
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
ENZ
290–440
IPR039448
IPR012334
STR
397–584
IPR012334
YP_010582014.1
1 587
Architecture
STR
STR 13-585 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010582014.1
1 587
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,9348
Central domain 25 576 553 0,9980
C-terminal 577 587 10 0,2661
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-24
Central
25-576
C-terminal
577-587

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SPG24
[NCBI] 		1497851 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010582014.1 [NCBI]
Genbank nucleotide accession
NC_030903.1 [NCBI]
CDS location
range 88929 -> 90692
strand -
CDS
TTGTCGAACTCGAACTATATGTACTTTGTTGACTTTGAGAAATTCGGAATCAGGTCTGATGGGACAGAGGCTAGAGCAACCACTGACGGGTGGATTGCTGCACTTAAAGAGGCTGTAGAGCTCGGATATCACACAGTATACGTTCCAGAGGGTCTTTACCTTATTGACGCTGTAAGCACTGTAGGCAGTCTTCCAGAGTACGGTGGTGGCTTAATGTTCCCATCAAACATCGAGGTCATCTTTCATGAGAGAGCACTATTTCAGGTAGCGCCAAATAGTTCAACAGGGTACGCCTGCTTCAACCTTGAAAATGTGGAAAATGTGACTCTTCGAGGAGGAACGATCATCGGGGACCGCTACGAGCATGACTATGTTACAGATGGAGTACCAGATAAACGTAAAACTCATGAGTGGGGTCACGGAATCCATATTAGGGGCTGCCGTAACATCACAGTAGAGAACGCAACTGTCATGAACTGCACAGGTGACAACATCTGGGTGCCTTCTAAGGGTATGATGAACTGGGAGGACAGCACTTACATACCATCTGAGGGGATCACTATACGTAAATGTATTCTGATTCGAGGAAGACGTAATAACCTAGCCACGAACGGCTGCCTTGGCATGAATGTTGATGACTGTGATTTCATCGAAGCTGGCGGAGACACTATCGGACCCGCATTCGGTATCGACTTAGAGGGATTCGCCGAAAACAGCATTAAGTACGACCATCCTTATGAAATCAACATCACGAACTGCCGCTTCAAAAGAAATGGTAAAGGCGCCTTAAACATCAACGTTACAGGGAAAGTTCATGCTACTAATAACTTCTCCGATGATGTGTTCAACTATGGGTTCTCGACAGATAGTACGATTAGCAATAACACGATCACTAACGAGACAGGGATAGACAAACCATACGGTATAGACTCCATCCGTAAGTCCTCCTCCGAAACTGGTAACCGTACAATCATCACAGGTAACCAGATTAGAGGATTTGCTACAGGTATTTGTGCCCGAGGTGTAGGTGTTATTGTCAGCCAAAACTATCTTGAGGATATTAGCTCCGTGGGGATCAATCCTTACCTTTCCGAAGATGTTATGGTAGCTAATAATACGATTAACAGTGATTGCCTGCATATATGGGTCCGTAACTCTGTGGATGTTCAGGTAGGCAACAACAAGGGTAAGGGCGCTGAGAATTACTACGGAATCAAAGTAGAGGACTCCAGTGATGTAGTTGTCAACGATAACAAACATGTAGCCAAAGGCGGCATTCAGGTTGCCCGGTCAACAAATGTACGTATCAAAGACAATGATTTAACTCTTATCGGTAATGGTAACGGTATTAGCTGGGACAAGACTTCACAAGTTAAGTTGGTTAAATCCAACTGGATAAGTGGTGCTGTAGCAGCTGCTATTTCCGGCTACGCAGACGCTTACTCCACTATTATCTCCTATAACATCTTAGAAGACTGCAAGTACCTAATCGCTATCTACTTGAATGGCGGGGCACACCACATGCTTAAAGGTAATGACATCATGTTCAGAAGAGGAGCTAACGGAGGATACGGAGTTCAGTTAGTAAACACCACACAAGCTAGATTAATCAGCAATGATGTCCGTACAATGGACGGCTGCACTCTGCATGCTTCTTACGACTCCACAGGATCAACATACACAAAGTATGCGTATAACACTTACATCGGAAAGATCAACCTTGGTCAAGCAGACACTGAAAACTACAACACAAAATTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8fc2e5c0b180d0b7e12246cd7577c12d5c50b03039c871703261f5447210b516
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8822
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome of SPG24 was analyzed in behalf of its correct identification and originality Lee,O.H. 2021-03 — GenBank