Protein

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Genbank accession
XXK86359.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINSHYSPNNNSIFHSDMPFVLVDGTYEAGLGDAGNGFFVCQMPSDIINIKSNDPGRVILTAIEINGTHRAFLNGTQSKVGQTIVATQADPFRSFASVSQTSGFAFGNSLASGTYNYNPSIGHEESISRNGTGGTTLHSTYHGIVRPGAGAPVGITVAEAFAQLGFPTNSSTVPIDGNNQYYWDPGWMSPLGSAYRGHDWFYVCNSNIRGYGGVRQGLPGSVNTMYHDGGNRFVCRGSTTNLANQSGNATILQDWYNITPTKVIWYVLNLRYSNGNMGISGNPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEFIGNNAAYTGAFGDTTARCELVGSSNGSLWSPIDYGGAKSQVSIYKFGAGKQWYVNSSNNTIGNEHGVVWGPSSVPLRLFSGNVGSSYMGDDITPYYPGTGDRYVALSTIGLGIPGGNATVILTTEVISGNLNCAGVPANTWNNGVFQVQGRRAYSYSNGDAIFHQILTLPVGYLVPFHTTSAFRYTPNNALSRNSFIYTVKNLGNGNVELGVVMHVSLGSAVFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:585 AA
molecular weight: 62541,78300 Da
isoelectric point:7,67692
aromaticity:0,11624
hydropathy:-0,17419

Domains

Domains [InterPro]
IPR059609
RBD
1–585
IPR059609
XXK86359.1
1 585
Architecture
RBD
RBD 1-585
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXK86359.1
1 585
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2141
Central domain 11 209 200 0,4471
C-terminal 210 585 375 0,8014
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-585

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage WP85
[NCBI] 		3446685 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXK86359.1 [NCBI]
Genbank nucleotide accession
PV844355 [NCBI]
CDS location
range 107332 -> 109089
strand +
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATAGTCACTATAGTCCAAATAATAATAGTATTTTTCATAGTGATATGCCATTTGTCCTAGTTGATGGTACTTATGAGGCTGGGTTAGGTGATGCCGGAAATGGGTTTTTTGTATGTCAGATGCCCTCTGACATAATAAATATTAAATCTAATGACCCAGGTAGAGTTATACTAACTGCCATTGAGATTAATGGTACTCATAGGGCTTTTCTTAATGGTACTCAGAGTAAGGTGGGTCAAACTATAGTTGCCACTCAAGCAGACCCCTTTAGATCTTTTGCTAGCGTTTCCCAGACTAGTGGATTTGCATTTGGTAATAGCCTGGCATCTGGAACATATAACTATAACCCATCTATAGGTCATGAAGAATCTATTTCTAGAAATGGTACTGGTGGAACTACCCTACATAGTACTTATCATGGTATAGTTAGGCCAGGTGCAGGAGCTCCAGTAGGTATTACTGTCGCAGAAGCTTTTGCACAGCTGGGTTTTCCTACTAATAGTAGTACAGTACCTATAGATGGTAATAACCAATATTACTGGGACCCAGGATGGATGTCTCCTTTAGGATCAGCATACAGAGGGCACGATTGGTTCTATGTTTGTAATTCTAACATACGTGGGTATGGTGGGGTAAGACAAGGTCTTCCTGGTAGTGTAAATACTATGTATCACGATGGGGGTAACAGATTTGTTTGTAGGGGTTCTACAACCAACTTAGCTAATCAATCTGGTAATGCTACAATATTACAGGATTGGTATAACATAACTCCTACTAAGGTTATTTGGTATGTACTTAATCTGAGGTATTCTAATGGTAATATGGGTATCTCTGGTAATCCTTTTACTGGTTCAGATATTCTTATCTCTCCCTCTAATTTTACTATAAAAGGGGTCAGTTTACCGAATACTGGATATAAGTTTATCAACCAAAATGCTTTTGGTAACTTAGGCTATAGGCCAGATATGGAATTCATCGGAAATAACGCAGCGTACACTGGAGCCTTTGGAGATACCACTGCAAGATGTGAACTTGTGGGTTCTAGTAACGGGAGTTTATGGTCTCCTATAGATTATGGAGGGGCTAAGTCTCAAGTTAGTATTTACAAATTCGGAGCGGGTAAGCAATGGTACGTAAACTCAAGTAATAATACTATTGGTAATGAACATGGTGTTGTTTGGGGACCTTCTTCAGTTCCTCTGAGACTTTTTAGTGGAAATGTTGGTAGTTCTTACATGGGAGATGATATTACTCCTTACTACCCCGGAACTGGAGATAGATACGTGGCTCTATCTACTATTGGACTAGGAATTCCAGGAGGTAACGCTACTGTTATTCTTACTACTGAAGTTATATCTGGTAATCTTAATTGTGCGGGTGTTCCGGCTAATACATGGAATAACGGTGTATTTCAGGTGCAGGGAAGAAGAGCTTATAGCTATAGTAATGGAGATGCAATATTCCACCAGATTTTAACATTACCTGTAGGTTACTTAGTACCCTTTCATACTACATCTGCATTTAGATATACACCTAATAACGCACTGAGTAGAAATAGTTTCATATATACAGTTAAAAATCTAGGAAATGGAAATGTAGAATTAGGGGTAGTTATGCACGTAAGTTTAGGAAGTGCAGTTTTCCTACCTAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7ea1ace667d98d4aa777b98bcaa174877a30ab7cec555129e63f43c678a16f3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8555
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50