Protein

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Genbank accession
XYR92491.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MQSTNRPAKFLVPFAQNDSARVEIPATTADATRFSQSLGSPPLTGMPPEAGGVPPQLEDFNGAMNQIARGVWWALGGGRFAYDSDWANNGLIGGYARGAVVPAALGAGSVGLGEWYNNTEGNTADPDAVGTGWVPGYNYGTTALVNQTGGTITLSPAQAAKRKITIAGTLTSNLVLIVPGWVYDWNFYNATAGAFTVTVKNATTAGVVIPQNSQATPVHCDGSIVSAFSPNVGLATLPTQPAQFSQTTGRLLNVLRFDASATYTPSPLAKYVIVEAVGGGGAGGGTVAAGAGSAAAGGGGGAGAYFRTRVVVDFSSIAVTVGVGGTPSMGAAGSNGSASTFGSASAPGGSPGGLGTAATAFPTLGAAGSGSNIATGANLVVAAGSVGNYSLLLSATQGISGSGGPSVYGGGGGFPQTGSAAGNSFPGSDAVVPGAGGGGALSLSGSSARAGGTGGRGVVLIYEYA
Physico‐chemical
properties
protein length:465 AA
molecular weight: 45088,35780 Da
isoelectric point:5,83079
aromaticity:0,07957
hydropathy:0,15140

Domains

Domains [InterPro]
DC_1179
STR
1–465
DC_1179
IPR049304
STR
261–462
IPR049304
XYR92491.1
1 465
Architecture
STR
STR 1-465
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PhiXhv-5
[NCBI] 		3447913 Viruses >
Host Xanthomonas hortorum pv. vitians
[NCBI] 		83224 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas hortorum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR92491.1 [NCBI]
Genbank nucleotide accession
PV764598.1 [NCBI]
CDS location
range 39265 -> 40662
strand +
CDS
ATGCAATCGACCAATCGCCCGGCTAAGTTCCTGGTGCCCTTCGCCCAGAACGATAGCGCGCGCGTCGAGATCCCGGCCACGACCGCCGATGCGACGCGCTTCTCCCAGTCGCTGGGCTCGCCGCCGCTGACCGGCATGCCGCCCGAAGCCGGTGGCGTCCCGCCGCAGCTCGAAGACTTCAACGGTGCGATGAACCAGATCGCTCGCGGCGTCTGGTGGGCGCTCGGCGGTGGTCGGTTTGCATACGACAGCGATTGGGCGAACAACGGCCTGATCGGCGGCTATGCCCGCGGCGCCGTCGTGCCGGCTGCACTAGGTGCTGGCTCTGTTGGCCTAGGTGAGTGGTACAACAACACCGAAGGCAACACTGCCGATCCGGACGCGGTCGGCACAGGTTGGGTGCCTGGCTACAACTACGGCACGACCGCGCTCGTCAACCAGACCGGCGGCACGATCACCTTGAGCCCGGCGCAAGCGGCTAAGCGCAAGATCACCATCGCCGGCACGCTGACCTCTAACCTGGTGCTGATCGTCCCGGGTTGGGTCTACGACTGGAACTTCTACAACGCCACCGCCGGCGCGTTCACTGTCACCGTGAAGAACGCAACGACGGCCGGCGTGGTCATCCCGCAGAACTCGCAAGCGACGCCGGTCCATTGCGACGGGTCTATCGTCTCGGCATTCAGCCCGAACGTCGGCTTGGCGACGCTCCCCACGCAGCCGGCGCAGTTCAGCCAGACCACCGGCCGGCTGCTGAACGTGCTGCGCTTCGACGCCTCCGCGACCTACACCCCGTCGCCGCTGGCTAAGTACGTCATCGTCGAGGCGGTCGGTGGCGGCGGCGCCGGTGGCGGCACCGTAGCAGCTGGCGCCGGTAGCGCTGCAGCCGGGGGCGGTGGCGGCGCCGGTGCGTACTTCCGTACGCGCGTGGTGGTGGACTTTTCCTCGATCGCGGTCACTGTAGGTGTGGGTGGCACGCCGTCGATGGGCGCTGCTGGCAGCAACGGCTCTGCATCGACCTTCGGCTCGGCCTCGGCACCTGGTGGCTCGCCTGGCGGCCTCGGCACGGCTGCTACCGCATTCCCGACGCTTGGCGCAGCGGGCAGCGGCTCGAACATCGCCACCGGTGCTAATCTGGTGGTGGCTGCGGGCTCGGTCGGTAACTACTCACTGCTGCTATCCGCAACGCAGGGCATCAGCGGCTCGGGCGGTCCGTCCGTGTACGGTGGCGGCGGTGGCTTCCCGCAGACCGGCTCCGCGGCTGGTAACAGCTTCCCAGGCTCGGACGCCGTCGTGCCGGGTGCCGGTGGGGGCGGCGCGTTGTCGCTGTCGGGCAGCTCGGCGCGCGCTGGCGGCACCGGGGGCCGCGGTGTGGTGCTGATCTACGAATACGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f6a9c02fc237621f901d7e4a2750a5cc1a8c365401ab3501ec9636d450da91a0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9172
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50