Protein

View in Explore
Genbank accession
QIG64875.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKKFHSINNNKIIDKISVNKAYVEGIYNDSPLNRKLGRVGMGYMEYERHLKEEKEKKEKNQIPENISDLNFKKENGKEVASYKINNSEIKIELNSHVKHGDKNFTLTVKSVDGITTYDNLSTPQLTRQMKILKSEGGKINKEPLYKKIPLTEEELDKKYGNIGFNYVYYKDNLDIKVWMREDSQKGKSKFNIYVIDSDTKKRKSFTNLNLEEAHNKLLEFDLNPNIDKPLSKEQLKEMNRIKMEEKYGIGYENSDNYISPLLEEYKLIDTKTDKIKHSDIKIGKFKINILPTGKYLALVVKEEGNSIQEKLIKISNDKNSLSKELDKIANDENYSLKNEDDIIPTKDIGITFNKNGEAIFQNNDVVTYYNVNPNDKSKIDIVVYDKQGNVLGMDSTNVNNFKNVIEDLELNVDKENQVSIVKDFFKKNNGIPAKDLVENYSNPNILANIPNVSDTREKFDIQDFESILSKKGLVNNKWNKNKREVYAWLKSQAFINWLNNMPNSNKGISKRKIYEKMIENADRIYPNSNDKWSSGGVFGFDNIKQKIVKEFY
Physico‐chemical
properties
protein length:552 AA
molecular weight: 64074,93820 Da
isoelectric point:8,90381
aromaticity:0,09058
hydropathy:-0,87120

Domains

Domains [InterPro]
Coil
Unmapped
398–418
Coil
QIG64875.1
1 552
Architecture
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC03
[NCBI] 		2710505 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG64875.1 [NCBI]
Genbank nucleotide accession
MT074146.1 [NCBI]
CDS location
range 101484 -> 103142
strand +
CDS
ATGAAAAAGTTTCATTCCATAAATAATAATAAAATTATAGATAAAATAAGTGTTAATAAAGCTTATGTTGAAGGTATTTATAATGATTCTCCTTTAAACAGAAAATTAGGTAGAGTGGGAATGGGATATATGGAATATGAAAGACATTTAAAAGAAGAAAAAGAAAAGAAAGAAAAAAATCAAATACCAGAAAATATTTCTGATTTAAATTTTAAAAAAGAAAATGGAAAAGAAGTTGCTTCTTATAAAATAAATAATTCTGAAATTAAGATAGAATTAAATTCTCATGTAAAACATGGAGATAAAAATTTTACCTTAACAGTTAAATCTGTTGATGGTATTACTACTTATGATAATTTATCAACTCCTCAATTAACAAGACAAATGAAAATATTAAAGTCTGAAGGAGGAAAGATAAATAAAGAACCTTTATATAAAAAAATACCTTTAACAGAAGAAGAACTAGATAAAAAATATGGAAATATAGGATTTAATTATGTATATTATAAAGATAATTTAGATATTAAAGTGTGGATGCGTGAAGATTCACAAAAAGGAAAATCTAAATTTAATATATATGTTATTGATTCTGATACAAAAAAGAGAAAATCATTTACTAATTTAAATTTAGAAGAAGCTCATAATAAATTATTAGAATTTGATTTAAATCCAAATATAGATAAACCTTTAAGTAAGGAACAATTAAAAGAGATGAATAGAATAAAAATGGAAGAAAAATATGGTATTGGTTATGAAAATTCAGATAACTATATTTCTCCATTATTAGAAGAATATAAATTAATTGATACAAAAACAGATAAAATAAAACATTCAGATATTAAAATAGGTAAATTTAAAATAAATATCCTTCCAACAGGAAAATATTTAGCTTTAGTAGTTAAAGAAGAAGGTAATTCTATTCAAGAAAAATTGATAAAAATTTCTAATGATAAAAATTCATTATCAAAAGAATTAGATAAAATAGCAAATGATGAAAATTATTCATTAAAGAATGAAGATGATATTATACCTACTAAAGATATAGGAATTACTTTTAATAAAAATGGAGAAGCTATATTTCAGAATAATGATGTAGTTACTTATTACAATGTAAATCCAAATGATAAATCTAAAATAGATATAGTTGTTTATGATAAACAAGGAAATGTTTTAGGTATGGATTCTACAAATGTAAATAATTTTAAAAATGTAATTGAAGATTTAGAATTAAATGTAGATAAAGAAAATCAAGTTTCTATTGTAAAAGATTTTTTTAAAAAGAATAATGGTATTCCAGCAAAAGATTTAGTAGAAAATTATAGTAATCCTAATATATTAGCTAACATACCAAATGTATCTGATACAAGAGAAAAATTTGATATACAAGATTTTGAAAGTATATTATCTAAAAAAGGATTAGTTAATAATAAATGGAATAAAAATAAAAGAGAAGTTTATGCTTGGTTAAAATCTCAAGCTTTTATAAATTGGCTAAATAATATGCCTAATTCAAATAAAGGTATATCTAAAAGAAAAATTTATGAAAAAATGATAGAAAATGCTGATAGAATATATCCAAATAGTAATGATAAATGGAGTTCTGGAGGTGTATTTGGTTTTGATAATATAAAACAAAAAATAGTAAAAGAATTTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88d9bdc276007efe8fd5759b76dd0b257be7fd4149eada9be1b84ae948db5eb4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank