Protein

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Genbank accession
XCO39456.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,93
Protein sequence
MPGDPAGVAGIVFGGPTNKAAIVIDARGRIQTYAVVDGKLSAAQISTPIIQGTGYFNNGFEDKIVRFPSAGGEADDLSPGILITTNANGICDFFRC
Physico‐chemical
properties
protein length:96 AA
molecular weight: 9890,07770 Da
isoelectric point:4,71709
aromaticity:0,08333
hydropathy:0,15833

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39456.1
1 96
Domain Start End Length (AA) Confidence
N-terminal 1 44 44 0,4039
Central domain 45 85 42 0,8345
C-terminal 86 96 10 0,4974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-44
Central
45-85
C-terminal
86-96

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146029
[NCBI] 		3232209 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39456.1 [NCBI]
Genbank nucleotide accession
PP889479 [NCBI]
CDS location
range 145798 -> 146088
strand +
CDS
ATGCCTGGCGACCCTGCGGGTGTAGCGGGAATAGTATTCGGTGGACCCACTAACAAGGCGGCCATCGTCATAGACGCACGCGGCCGCATCCAGACCTACGCCGTGGTTGACGGGAAATTATCCGCCGCACAAATTTCAACGCCTATCATTCAGGGGACGGGGTATTTCAATAATGGGTTTGAGGATAAAATTGTCCGATTCCCATCCGCCGGAGGTGAGGCTGATGACCTAAGCCCCGGCATTCTGATTACTACGAACGCCAACGGAATCTGCGATTTTTTTCGTTGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cac23bf2a9049af036188b010798149af6d2ea4d8ecd172a3df50b55838408b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank