Protein

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Genbank accession
WEY17683.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVNKLPVPVGAKGGSSKPKSPTEMEDNLISIDKIRVLLAVSDGEVDPEFSLMNLYLDDVPVESSDGTINYPGVKAEFRPGTQYQDHIKGFTDTASEITLGSRITTTTPYVIAVTNKTLDAIRIKMMMARGVRVEDDGDQVGVSVEYAVDIAVDGGAYTEYMTDVIEGKTTSGYDRSSRIDLPAFNTQVLLRIRRITADSQSSNVVDGIQLQSYAEVIDAKFRYPLTGLVYVEFDSELFPNQIPNISIKKKWKLINVPANYDPITRTYSGTWNGLWKKAWSNNPAFVLYDLITNQRYGLDQRELGIEIDKWSIYECAQYCDQMVPNGKGGTEPRYLCDVVIQSRVEAYQLIRDICSIFRGMSFWNGESLSIVIDKPRQPSYIFSNENVIGGEFTYTFASEKSMYTQCNVTFDDAQNFYSQDIEGVFDPEMTLRFGHNPTAITAIGCTRRSEANRRGRWVLKTNVRSTTVNFATGLEGMIPTIGDVIIVADNFWCSALTMNLSGRVMEVSGLQVFLPFKVDASPGDRIIVNKPDGAPVGRTIASVTPDGKTITINTTFGFDVQPDSIFAIERTDLAQQQYVVTEIKRGDGEEEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDILPAPKNVKVSSYSRIVQGMSVETMRVTRDKVEYATLYEMQWRKDNGNWNNTPQTASKEMEVEGIYAGNYHVRVRSVASNGSSSGWSAIVSVHLSGKVGEPNAPINMTATDNEVFGIRVKWGMPDGSGDTAYIELHRAPNGSDGHPIEDEASLFTLVPYPQHEYWHSILPAGQVIWYKARAIDRIGNVSAWTPFVRGMSSVDTSIITDHIKVDIENSEGYQFLKENAVNTTNKAHAAAEATIENALANDKDVRVQRVKNGKFTAQIKESLRLIADETEARVTQVSQLEADFDGKINAQNSELREVIATGDEALSRSIDDLRAEIGDDIQGQITEVKEAIVTETEARVTADTALSTRIGDNEAALNQKLDSRIDAEGAGVMYGVNLGLKYNGQEYSAGMALSLVGDGTGVKSQMLFSADRFAIISNAQAGAFTLPFVVENNRVFINSLLVKDGTITTAKIGIFEPYFLRRNLVCIFQQNMTHRGLRFCSPLMLRRSDYQARKKALSILTGQIYPLHQGYIYRSSRQRQR
Physico‐chemical
properties
protein length:1154 AA
molecular weight: 128269,89280 Da
isoelectric point:5,09263
aromaticity:0,08752
hydropathy:-0,31438

Domains

Domains [InterPro]
DC_0014
STR
1–1109
DC_0014
IPR053171
Unmapped
9–874
IPR053171 IPR015406
IPR055385
ATT
94–219
IPR055385 IPR032876 IPR013783
WEY17683.1
1 1154
Architecture
STR
ATT
STR
ATT
STR
STR 1-93 | ATT 94-219 | STR 220-342 | ATT 343-507 | STR 508-1109 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WEY17683.1
1 1154
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,9048
Central domain 506 1099 595 0,0883
C-terminal 1100 1154 54 0,9297
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-505
Central
506-1099
C-terminal
1100-1154

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Vc1
[NCBI] 		1480731 Uroviricota > Caudoviricetes > Drexlerviridae > Jhansiroadvirus gwaliVC1 >
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEY17683.1 [NCBI]
Genbank nucleotide accession
MT360682.2 [NCBI]
CDS location
range 15585 -> 19049
strand +
CDS
ATGGTTAATAAATTACCTGTTCCAGTCGGTGCGAAAGGCGGATCAAGCAAGCCTAAATCGCCTACTGAAATGGAAGATAACCTGATATCTATTGATAAGATTAGGGTTTTGCTTGCTGTTTCTGACGGTGAAGTTGATCCTGAATTTTCGTTAATGAACTTATATCTTGACGACGTTCCTGTTGAAAGTTCTGATGGAACAATAAACTATCCCGGCGTCAAGGCTGAGTTTAGGCCCGGAACTCAGTACCAGGATCACATTAAAGGATTCACCGATACCGCTAGCGAAATAACTTTAGGGAGTAGAATCACCACAACAACGCCTTATGTTATTGCTGTAACAAATAAAACTCTTGATGCAATAAGAATTAAAATGATGATGGCGAGAGGCGTAAGGGTTGAAGATGATGGAGATCAGGTCGGCGTTAGCGTTGAATATGCGGTTGACATTGCTGTTGATGGTGGAGCGTATACTGAATACATGACTGATGTCATCGAAGGCAAAACAACAAGCGGCTACGACAGAAGCAGTCGCATTGATTTGCCAGCGTTCAATACCCAAGTTTTGTTGAGAATTCGCCGTATAACAGCAGATAGCCAATCCAGCAACGTTGTTGATGGTATTCAGTTGCAAAGTTATGCCGAGGTTATAGATGCTAAATTCCGTTATCCTCTGACTGGTCTGGTTTATGTTGAATTTGATTCCGAATTATTCCCGAATCAGATCCCTAATATTTCCATCAAAAAGAAATGGAAGTTGATAAACGTTCCTGCTAACTACGATCCTATAACAAGGACATATTCAGGAACATGGAACGGTTTATGGAAAAAGGCATGGTCGAATAATCCTGCTTTCGTTCTGTATGATTTGATTACCAATCAGCGTTACGGACTCGATCAACGCGAATTAGGTATTGAGATTGATAAGTGGAGCATTTACGAATGTGCGCAGTATTGTGATCAGATGGTTCCTAATGGGAAAGGAGGAACCGAACCGCGCTACCTTTGCGACGTTGTAATTCAATCCCGGGTTGAGGCGTATCAGCTTATCCGTGATATTTGCTCAATCTTCCGTGGCATGAGCTTTTGGAACGGCGAAAGCCTGTCAATCGTGATCGATAAGCCGCGCCAGCCGTCCTACATTTTCAGCAATGAAAACGTGATCGGCGGTGAGTTCACTTACACTTTCGCAAGCGAAAAGAGCATGTACACACAGTGCAACGTGACATTCGACGATGCGCAAAACTTTTACTCTCAGGATATTGAGGGCGTTTTTGATCCTGAAATGACTTTGCGGTTTGGTCACAATCCGACAGCAATCACAGCTATCGGATGCACACGCCGCAGCGAGGCTAACCGCCGAGGGCGCTGGGTTCTGAAAACCAACGTTCGAAGCACTACGGTAAACTTTGCTACTGGCCTTGAGGGTATGATCCCGACTATCGGCGACGTGATCATTGTTGCGGATAACTTCTGGTGCAGTGCGTTGACTATGAATCTTTCTGGTCGCGTGATGGAGGTTAGCGGGTTGCAGGTATTCTTACCGTTTAAGGTTGATGCGAGTCCCGGCGATCGCATTATCGTAAACAAGCCAGACGGCGCACCAGTAGGCCGCACGATTGCCAGCGTAACGCCGGACGGAAAGACGATAACGATCAATACAACTTTCGGGTTTGACGTTCAGCCAGATTCAATCTTTGCCATTGAGCGCACAGATTTAGCGCAGCAGCAGTATGTTGTTACCGAAATCAAGCGCGGTGACGGTGAGGAAGAATTTACGTACAGCATAACGGCTGTCGAATACGATCCGAACAAGTACGACGAGATTGATTACGGCGTGAACATCGACGACCGACCGACTTCAATCGTGCAGCCTGACATTCTGCCAGCGCCGAAAAACGTTAAGGTTTCGAGCTACAGCCGAATTGTTCAGGGAATGAGCGTTGAAACAATGCGCGTAACCCGGGATAAGGTAGAGTATGCAACGCTATACGAAATGCAGTGGCGTAAGGATAATGGAAACTGGAACAACACGCCGCAGACGGCGAGCAAAGAAATGGAAGTTGAAGGTATTTACGCCGGAAACTATCACGTGAGGGTTCGTTCTGTTGCGTCGAATGGTTCAAGTTCTGGATGGTCTGCGATCGTTAGTGTTCACCTTTCCGGCAAGGTTGGTGAGCCAAACGCACCGATTAACATGACCGCCACTGATAACGAGGTTTTTGGTATTCGCGTCAAGTGGGGTATGCCTGACGGCTCCGGTGATACTGCATACATTGAGTTGCACCGGGCACCAAACGGATCGGACGGACACCCGATCGAAGATGAGGCAAGCTTGTTTACTCTTGTGCCGTACCCGCAACATGAGTACTGGCACAGCATTTTGCCAGCAGGACAAGTGATCTGGTACAAGGCGCGAGCCATTGACAGAATCGGAAACGTTTCAGCTTGGACTCCTTTTGTGCGCGGTATGTCTTCCGTTGATACAAGTATCATAACGGATCATATCAAGGTTGATATTGAGAACTCAGAGGGGTATCAATTCCTGAAAGAAAACGCAGTAAACACAACTAACAAGGCACATGCAGCAGCAGAGGCTACCATTGAAAACGCATTAGCCAACGATAAAGATGTTCGAGTACAGCGAGTGAAGAACGGAAAGTTCACGGCGCAGATCAAAGAGTCTTTAAGACTTATCGCAGATGAGACAGAAGCGCGTGTTACTCAGGTGTCACAACTGGAAGCTGATTTTGACGGCAAAATTAACGCCCAAAACAGCGAATTGAGAGAGGTTATTGCGACTGGTGACGAAGCGTTAAGCCGTTCAATTGACGATCTTAGAGCGGAGATAGGAGACGATATTCAGGGGCAAATAACAGAGGTTAAGGAGGCTATAGTTACAGAAACAGAAGCGCGTGTTACGGCTGATACTGCGTTATCTACACGCATTGGTGACAATGAGGCGGCATTAAACCAGAAGCTTGATTCCCGGATTGATGCCGAGGGTGCTGGCGTGATGTACGGCGTTAATCTTGGCCTGAAATACAACGGACAGGAATATAGCGCTGGGATGGCGTTGTCACTTGTTGGCGATGGCACTGGCGTGAAGTCGCAAATGCTTTTCTCCGCCGATCGGTTTGCAATCATCAGCAACGCACAGGCTGGAGCGTTTACGCTTCCGTTTGTGGTTGAGAATAACCGGGTGTTTATCAACAGCCTGTTGGTTAAAGATGGAACCATCACAACGGCGAAGATTGGTATTTTTGAACCTTATTTTTTGAGGCGTAATCTTGTTTGTATTTTTCAACAAAATATGACACATCGCGGGTTAAGGTTTTGTAGTCCTCTGATGTTGCGAAGATCTGACTATCAAGCTCGGAAGAAAGCCCTTTCAATCCTGACAGGTCAAATTTACCCACTGCATCAGGGATATATTTATAGATCTTCTCGCCAACGTCAACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
71904a3baccf1086dbb48b3ce13425f37a3a9e1262728054518d9a8834f69ead
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7574
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50