Protein

View in Explore
Genbank accession
WWQ71641.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAWYSTGTVAVTANSPTVTGTGTQFSSNARVGDAFRGPDGRWYEVTNVASSTVISIKPNYQGSTASGQAYAVAPILGYDKDLSDRFNLIANQWGATLAGIKPWALSANAAAARGDLGLGSAAVREALGSSGALYSRDSILGAVSQSIGVPTGAVIDRGSNANGEYVRFADGTQICWTNTLTFTAGVTSVGANWSYPASFSSSYPIAGAVSASGAGGDYDSGVSARNQGATYFNPSAGTAGVGFFCISSASFTSGAQTRNNRVVAIGRWF
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27432,77540 Da
isoelectric point:8,55974
aromaticity:0,10781
hydropathy:0,00000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Alize
[NCBI] 		3096999 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ71641.1 [NCBI]
Genbank nucleotide accession
OR683400.1 [NCBI]
CDS location
range 37335 -> 38144
strand +
CDS
ATGGCGTGGTACTCAACCGGAACCGTGGCGGTGACCGCAAATAGCCCGACCGTTACCGGTACCGGCACACAGTTCTCGTCCAATGCCCGAGTCGGCGACGCATTTCGCGGACCCGATGGACGTTGGTACGAGGTCACAAACGTCGCCAGTTCGACGGTCATCTCGATCAAGCCCAACTACCAGGGCAGCACGGCCAGCGGCCAGGCCTATGCGGTGGCGCCGATCCTGGGCTACGACAAGGACCTGTCGGATCGATTCAACCTGATCGCCAACCAGTGGGGGGCAACCCTGGCGGGGATCAAGCCCTGGGCGCTTTCTGCAAATGCGGCGGCAGCGCGGGGGGATCTCGGCCTCGGCAGTGCGGCGGTACGGGAGGCGCTCGGTAGTTCGGGCGCGCTGTATTCGCGAGACAGCATCCTCGGCGCCGTTTCGCAGTCGATAGGCGTACCGACCGGTGCGGTGATTGATCGCGGGAGTAACGCGAACGGGGAGTATGTGCGGTTCGCGGATGGGACGCAGATTTGTTGGACGAACACTCTCACCTTCACCGCTGGGGTCACGTCGGTCGGTGCGAACTGGTCGTACCCGGCGAGCTTTAGTTCCTCGTACCCCATCGCTGGGGCTGTCTCCGCTTCTGGTGCTGGTGGAGACTATGACTCTGGCGTGTCGGCGAGAAACCAGGGAGCGACCTACTTCAATCCATCCGCGGGTACGGCTGGGGTGGGGTTCTTCTGCATATCGTCGGCATCATTCACATCAGGCGCTCAGACTAGGAATAACAGGGTCGTCGCCATCGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
241ccae7a3573a83e6421dbbfc002f348b522617fae91e05bbdf4fabaed912fc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7623
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank