Protein

View in Explore
Genbank accession
YP_010659586.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNSHNPFNTGGNGCPNDFRSGDQLVDRIIGDAYHVVKEVYLALGNLTYIYNYLQKYGLIITVDSEEAIKDIPLSIGKFARIYNKSETAGYYFTDYLYVDDDTSGIKPNEPGATGSWVSTKATGSNASFVRIWKYHAVTDGETTIQLPTDLPIVGVQTIYVQGIRQDLNEGFTYNEGDATITLADELETGNLVTVIIGITDPDMDIDIFAALKGTDGASNIGTSFGITVEDALKRNAIVYATEFGVTGDGVACGYACVAAIEYIMQNGGTLVFPKGEVNWGTTRHKFAIYNGKPCTIKGSDGGTTWTFDNVDPVANAPGASWPFSEPFLVEFGGQPTTQGVFVEPVTVENLTIDYTRQANKGGPTHELMGVGAHPTPYSDGTLGLRFSYCRSPVVRNVRMNEIYGSGIQFWKCSMALAENNYLYNVSANQPLGSSGNESVDHFGWAIWSGASPKTIIRRNTAINKRVFVCDPALKSPNNNVVYNGTLCGYIGIFAEYGSNGGTSTIYPPDFEWQSDSSADKRTYVTIEDNLVWGYTMSVKSEAATSVRILNNTLLNHYIGVSVQASADVVGNYINGLQADLQKCPQNGFESQRGGIQLSWWASSAQDHRQYVAQNYVYSAAYNCISIGKAYATIDDNQFTITGSARFINSVTSFNVDLLEMRGNKLLLSENCTQTVPMRITNCSKVVMEANFVENKSTTVRMSVQLVNPVIRNNTFKGWVQLYLASAGSIVEDNTATDPTNNKGLVIQVASADDCTIRRNRITKYNADDEDQIIFLSKAARTVIEGNIVNYDAVTGAGRTKSIPIIKTFGTCFYTRILNNRVVGDSSATFGFTLFDGVSGARVLECRGNSTDNATRQMFTMYSQSGPWFISGNDWAQTYSSEINTAANIYASYKPVQGEKVPYLRPQAGGAEGIVYTASGWLTYGSIASS
Physico‐chemical
properties
protein length:929 AA
molecular weight: 101256,91860 Da
isoelectric point:5,06313
aromaticity:0,10764
hydropathy:-0,20366

Domains

Domains [InterPro]
DC_0116
ATT
60–435
DC_0116 DC_0453
IPR012334
STR
240–491
IPR012334 IPR011050
IPR011050
STR
258–572
IPR011050
YP_010659586.1
1 929
Architecture
ATT
STR
RBD
STR
RBD
ATT 60-435 | STR 436-572 | RBD 573-620 | STR 621-908 | RBD 909-928 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010659586.1
1 929
Domain Start End Length (AA) Confidence
N-terminal 1 250 250 0,9922
Central domain 251 876 627 0,9958
C-terminal 877 929 52 0,9782
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-250
Central
251-876
C-terminal
877-929

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_SP5M
[NCBI] 		2750853 Uroviricota > Caudoviricetes > Schitoviridae > Gamaleyavirus > Gamaleyavirus Sp5m
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010659586.1 [NCBI]
Genbank nucleotide accession
NC_070869 [NCBI]
CDS location
range 64724 -> 67513
strand -
CDS
ATGAATTCTCATAACCCATTTAACACAGGCGGTAATGGTTGCCCTAATGACTTTCGGTCTGGTGATCAATTGGTTGACCGAATCATTGGTGATGCCTACCACGTAGTAAAGGAGGTATACCTTGCACTGGGTAACCTTACTTACATCTATAACTACCTACAAAAGTATGGCCTGATTATTACTGTAGATAGTGAGGAAGCAATCAAGGACATTCCACTCTCTATTGGGAAGTTTGCTCGTATTTATAATAAATCAGAGACGGCAGGTTACTACTTCACTGACTACCTTTATGTAGATGATGATACTAGTGGTATTAAGCCTAACGAACCCGGTGCTACTGGTTCTTGGGTTAGTACTAAAGCCACTGGTTCCAACGCTTCGTTTGTTCGTATTTGGAAATACCATGCAGTTACTGATGGTGAGACTACTATTCAGTTACCTACAGATTTGCCAATTGTTGGTGTACAAACCATCTATGTACAAGGCATTCGACAAGACCTCAATGAAGGTTTTACTTATAATGAGGGTGATGCAACTATTACCCTTGCTGACGAGTTAGAGACTGGTAACTTGGTTACAGTGATTATTGGCATCACTGACCCAGACATGGATATCGATATTTTTGCTGCACTTAAAGGAACCGACGGGGCTTCTAACATTGGTACATCATTCGGTATCACGGTAGAGGATGCCTTAAAGCGTAACGCTATAGTTTATGCTACTGAGTTCGGCGTGACTGGGGATGGTGTTGCCTGTGGTTATGCATGTGTGGCGGCTATTGAATATATTATGCAGAATGGTGGAACGCTAGTGTTCCCTAAAGGTGAGGTGAATTGGGGAACTACTCGCCATAAATTTGCTATCTATAATGGTAAACCTTGTACTATCAAAGGTTCCGATGGCGGAACCACCTGGACATTCGATAACGTTGATCCAGTTGCTAATGCCCCCGGTGCGTCATGGCCGTTCAGTGAACCGTTCCTTGTTGAATTTGGGGGACAGCCGACCACACAAGGCGTCTTTGTGGAGCCAGTAACTGTTGAAAATCTCACTATTGACTATACCCGTCAAGCTAACAAAGGTGGGCCTACCCATGAGCTGATGGGGGTAGGGGCGCATCCTACACCATATTCGGATGGCACTCTTGGTCTGCGTTTTAGTTACTGCCGTTCGCCAGTAGTACGAAATGTTAGGATGAACGAGATTTATGGCTCAGGTATCCAGTTCTGGAAATGTTCTATGGCTCTGGCAGAGAACAATTATCTGTACAACGTTTCAGCTAACCAACCTTTAGGTTCCAGTGGCAATGAGTCTGTCGATCACTTTGGTTGGGCTATCTGGTCTGGTGCAAGCCCGAAAACGATTATCCGACGTAATACTGCGATTAATAAGCGTGTTTTCGTATGTGATCCAGCATTGAAATCCCCTAATAATAACGTGGTGTATAACGGTACTCTTTGTGGGTATATAGGTATTTTCGCAGAGTACGGGAGTAATGGGGGTACTTCCACCATCTACCCACCGGACTTTGAATGGCAGTCAGATTCTTCCGCTGACAAGAGAACCTATGTAACTATAGAGGACAACCTCGTATGGGGTTACACCATGTCAGTGAAGTCTGAGGCAGCTACTTCAGTTCGAATTCTGAATAATACTTTGTTAAATCATTATATTGGTGTATCTGTTCAGGCATCAGCTGATGTTGTAGGCAACTACATCAATGGATTACAGGCTGATTTACAAAAATGCCCACAGAATGGATTTGAATCGCAGCGTGGTGGAATTCAGCTTTCTTGGTGGGCATCATCTGCACAAGACCACCGTCAGTATGTAGCTCAAAACTATGTTTACTCGGCTGCGTATAACTGCATTTCCATTGGTAAGGCTTACGCCACAATTGATGATAACCAGTTTACGATCACAGGGTCAGCTAGGTTTATAAACTCGGTGACTTCCTTCAATGTAGACTTGTTGGAGATGAGAGGAAACAAGCTCCTGTTGTCTGAAAATTGCACACAGACAGTCCCCATGCGTATTACCAATTGTTCGAAGGTGGTGATGGAAGCTAACTTCGTAGAAAATAAAAGCACCACAGTTCGTATGTCAGTGCAGCTGGTCAACCCTGTAATACGTAACAATACTTTCAAAGGGTGGGTTCAGTTATATCTGGCATCGGCTGGCAGTATAGTTGAAGATAACACAGCTACCGACCCCACTAATAATAAGGGATTAGTAATCCAAGTGGCATCGGCGGATGACTGCACTATCCGCAGGAACCGGATTACAAAATATAATGCTGATGACGAAGATCAGATAATCTTCTTGTCAAAGGCTGCTAGAACGGTCATCGAAGGCAACATCGTAAACTATGATGCGGTGACTGGTGCGGGGAGAACGAAGAGCATCCCGATAATCAAAACATTTGGTACGTGCTTTTACACTCGGATCCTTAACAACCGGGTTGTTGGTGATAGTAGTGCTACATTTGGTTTCACTCTTTTTGATGGTGTGTCTGGGGCGAGAGTACTAGAATGCCGTGGGAATAGCACAGATAATGCAACTCGGCAGATGTTCACAATGTATTCTCAGAGCGGGCCTTGGTTCATTTCTGGAAATGATTGGGCACAGACATATAGCTCTGAGATAAACACCGCAGCCAATATCTATGCATCCTATAAGCCAGTCCAAGGGGAGAAAGTACCCTATCTTCGACCACAAGCAGGGGGTGCTGAGGGGATAGTTTATACTGCATCTGGATGGTTAACTTATGGTAGTATCGCATCTTCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c4ad095d46e28918c5d005d2120a44274017da950e57e333dd6a46dd75896b6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of eight phages infecting swine Enterotoxigenic Escherichia coli Ferreira,A., Oliveira,H., Silva,D., Almeida,C., Burgan,J., Azered,J. and Oliveira,A. 2020-09-03 — GenBank