Protein

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Genbank accession
APU01947.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MELIKIGQVVDDGQGDYLRRGGQKVNDNFTELFTQLGDGDRPFAAGAWKNHTVGVLTPKFGESWAINTSSGAISVNLPKGSVTDYNKAIKLRDVWSTWANQNVTLYAATGDTLKGSPLPRRLDKNLMDVELVYCAPGRWEYVENKRVDRITTSDLSTVAKREILVETDGQTDFPDVFGSSNYNIGNIEVYLRGNLLYYGSELSSNSNYGSIDPASPTGIIPLDGRSIRIRGIEILAGDTITFVTYMDGIASYRSSYNTRSVQVFSTTDSAKTSVAGEIWVGDIATKNSFSIEEIGIEMNNRINPNSLEVLINGILMSRAGDGDLPMFVCEGADGENQTDCQANGGNWVPSAIDYAMVLDDSGNVSQINFGNPFESGDMVTFRWFNNDIGTLLDWDGINGIKEKADQVYLNAEQQVTIQNGIEYTDFDNPSQKTAEVVPGVFTGRLDTIQMFFDSIYPIGTIYENANNPANPRDYMGLGVWKRYAEGKIVAGWTSNQADIEFSMNNNDLDSGGNPSHTAGGTYGAKSVELTPLNIPEISSTDKVLVSHPDGNIIIGGCLIDPDASGPGYTKYIESVLAVNKGNLSPANISILPPIITAYKWVRVG
Physico‐chemical
properties
protein length:604 AA
molecular weight: 65766,45090 Da
isoelectric point:4,49241
aromaticity:0,09106
hydropathy:-0,28974

Domains

Domains [InterPro]
IPR034695
Unmapped
1–604
IPR034695
DC_2238
STR
1–586
DC_2238
IPR036240
STR
2–230
IPR036240 IPR054430 IPR053827
IPR008987
ATT
3–146
IPR008987
G3DSA:1.20.5.960
Unmapped
13–45
G3DSA:1.20.5.960
APU01947.1
1 604
Architecture
ATT
STR
ATT
ATT 1-146 | STR 147-450 | ATT 451-603 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APU01947.1
1 604
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9670
Central domain 197 440 245 0,3676
C-terminal 441 604 163 0,9496
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-440
C-terminal
441-604

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage L9-6
[NCBI] 		1932905 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APU01947.1 [NCBI]
Genbank nucleotide accession
KY290956 [NCBI]
CDS location
range 87893 -> 89707
strand +
CDS
ATGGAACTAATCAAAATTGGACAAGTTGTTGATGACGGCCAAGGCGATTATTTGCGCCGCGGCGGTCAAAAGGTTAATGACAACTTTACAGAGTTATTCACGCAGTTAGGTGATGGTGATCGCCCATTTGCAGCAGGAGCATGGAAAAATCACACGGTCGGTGTATTGACTCCAAAGTTTGGCGAATCATGGGCGATCAATACATCGTCCGGCGCTATTTCCGTAAATCTGCCGAAAGGATCAGTAACAGATTACAACAAAGCAATTAAACTGCGCGATGTTTGGTCCACGTGGGCTAACCAAAACGTAACATTATACGCTGCTACTGGCGACACTCTTAAAGGTTCCCCGCTTCCTCGTCGTTTAGACAAAAACTTAATGGACGTTGAGCTAGTTTATTGCGCTCCTGGAAGATGGGAATACGTTGAAAATAAGCGTGTTGACCGAATCACAACATCTGACCTCAGCACTGTAGCCAAACGTGAAATATTGGTCGAAACTGATGGTCAAACTGATTTTCCAGATGTTTTTGGCTCATCTAATTACAACATTGGAAACATCGAAGTTTATCTCCGTGGTAACCTTCTGTATTACGGAAGCGAGTTGTCTTCAAACTCAAACTACGGTTCTATCGACCCAGCGAGCCCGACCGGCATTATTCCTTTGGATGGGCGAAGTATTCGCATACGTGGTATCGAAATACTTGCCGGCGATACCATCACATTCGTGACATATATGGACGGTATCGCGTCATACCGTAGCTCGTACAATACGCGAAGCGTTCAGGTATTTTCAACGACTGATAGTGCTAAAACATCGGTTGCGGGTGAGATTTGGGTTGGTGATATTGCAACAAAGAATAGTTTTAGTATCGAAGAAATCGGTATTGAAATGAACAACCGTATAAACCCAAACTCGCTCGAAGTCCTCATTAATGGCATATTGATGTCTCGCGCCGGCGATGGTGATTTGCCTATGTTTGTTTGTGAAGGCGCGGACGGTGAAAATCAAACAGATTGCCAGGCAAATGGCGGAAACTGGGTGCCGTCAGCGATTGACTACGCTATGGTTCTTGACGATAGTGGAAACGTTTCGCAAATCAACTTTGGAAATCCTTTCGAATCAGGGGATATGGTAACATTCCGTTGGTTTAACAATGATATCGGAACATTGCTTGATTGGGACGGGATTAACGGAATAAAGGAAAAAGCTGACCAGGTTTATCTGAATGCTGAGCAGCAAGTCACTATCCAGAACGGCATTGAGTACACTGACTTTGATAATCCAAGCCAGAAAACTGCTGAGGTAGTTCCAGGGGTTTTCACTGGGCGCCTGGATACAATCCAGATGTTCTTTGACTCTATATACCCAATAGGAACTATTTACGAGAATGCCAACAACCCTGCCAACCCTCGGGACTACATGGGTTTAGGCGTATGGAAAAGATACGCTGAAGGCAAAATTGTAGCCGGCTGGACGTCAAACCAAGCTGATATTGAATTCAGCATGAACAACAACGATCTGGATAGCGGCGGCAACCCGAGTCATACGGCTGGCGGAACATACGGCGCAAAATCTGTTGAACTGACTCCATTGAATATCCCTGAGATATCATCAACCGACAAAGTTCTTGTTAGCCACCCAGATGGAAACATAATCATCGGCGGATGTTTGATTGACCCGGACGCGAGCGGCCCTGGATACACAAAATATATAGAATCTGTTTTAGCAGTTAATAAAGGCAACTTGTCACCTGCTAACATAAGCATTCTTCCACCGATCATCACCGCATATAAATGGGTAAGGGTAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0cbc36315bc6dc12ecb01389dbb4e6f89f24645b052eb2ac41064ba0e01f109a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6488
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50