Protein

Genbank accession
YP_009843462.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDVQTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWLGFDRKGNTFLLPLYSNNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEVISYSPVIASTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPLARITKRLDFSDVYKVEWDIIPTASSDPVRIDFFGEIKND
Physico‐chemical
properties
protein length:300 AA
molecular weight: 34467,35750 Da
isoelectric point:4,91580
aromaticity:0,13333
hydropathy:-0,23267

Domains

Domains [InterPro]
IPR056389
1–298
IPR056389
YP_009843462.1
1 300
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HdH2
[NCBI] 		2508174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009843462.1 [NCBI]
Genbank nucleotide accession
NC_048748 [NCBI]
CDS location
range 96668 -> 97570
strand -
CDS
ATGTACTACTCTCTAATGCGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATGTACAAACCTCCTACGAAGAATTTAAGACCCTTCGTAGGACTATTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACTCCTTCTTCTATATCATTAGCAATAAATTTTAGTAATACTCTTACTGAAGCTAACTTCTTTGAATGGCTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTACCACTATATAGTAACAATATTGAACCTATTATGTTTAATATCTATATAGTAAATAAAGATAATAACTGTGTATACTTTGAGAACTGCTATGTATCTACAGTAGATTTTTCTTTAGATAAGAATATACCAATTCTTAATGTTGGTATTGAGTCAGGGAAATTCTCCGAAGTATCTACATATAGAGAAGCAGCTTCTATTATACAGGGTGAAGTAATATCTTATAGCCCAGTAATAGCTTCTACTAACGGTAGCATCTTACCTGGCCTTATTTCCGCTTCTTTATCTTTTCAACAGCAATGCTCTTGGAGAGAAGATAAGAGTGTTTTTGACATAAATAAAATCTATAATAATAAAAGAGCCTATGTAAATGAAATGAATGCTTCAGCAACCATTTCTCTATATTACTTAAAACGTTTTGCTGGAGATATGGTTTACAATATCGAACCAGAGACCGATGTACCTTTAAATATAAGAAATAATAATATTTCTATAGATTTTCCTTTAGCACGTATTACAAAACGCCTAGATTTCTCAGATGTGTATAAAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCAGTGAGAATAGATTTCTTTGGAGAAATTAAAAATGATTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
d5928d6e03ac3bf5b01a1923198b3a61b8274c8d1df7ccd532a9f03f56bc451d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8251
Evidence 0,8251
Download PDB

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank