Protein

View in Explore
Genbank accession
QBX24951.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MVKIEKVFFNDQELTQYITVTSDFHLWQGADFDPQFSDNDILSGSEFYYTKFGKKVISVPFFNCTATFEDYNQLLRILNVKEPKELRFSSRPNIVFYAIPSGKLDYERITRHAGKGSIDFVIVDGLGHSTATRSFNFTKNDFGVYEAEIVNDGTEDAYVSYEIKLKKESGYVAVTSPYGLLQYGKYDEEDGYIDRKNVTLLSNQKGDFANWTDGNVFYENPNKIVTTQMSSDAAFGGRLGLMPSSFTTSGTVGAFSYGACKEYVLETPVEQWYIWARAWFETGLVTQNGEWCLAVIDEDNHLLAGMAIEKNDRTRNEAYVRFLVGDGNGGSMVKKEIKFTPSYWIPPNPYGAQSIDRNSNMFDLVKEKDRVQFFWYGGYHPFSASQLNGKKAKRIQFYVGNYAGSNSTTEQFVTHHYLNDFSFSELHVPYWKDVPNRYPDGAVIEIDGEKGEIRVNNQIKKDDEIFGTTYFKVPPGTTKVQLNMSSFAELDYAKATIKEVYI
Physico‐chemical
properties
protein length:502 AA
molecular weight: 57204,24370 Da
isoelectric point:5,20181
aromaticity:0,14940
hydropathy:-0,45857

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
2–127
G3DSA:2.40.30.200
DC_0420
STR
2–502
DC_0420
IPR006520
Unmapped
9–128
IPR006520
IPR008841
STR
42–121
IPR008841
QBX24951.1
1 502
Architecture
ATT
STR
ATT 2-127 | STR 128-502
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX24951.1
1 502
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,9078
Central domain 183 381 200 0,1632
C-terminal 382 502 120 0,6280
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-381
C-terminal
382-502

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan220
[NCBI] 		2548052 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equinus
[NCBI] 		1335 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24951.1 [NCBI]
Genbank nucleotide accession
MK448877.1 [NCBI]
CDS location
range 30271 -> 31779
strand +
CDS
GTGGTAAAAATCGAAAAAGTATTTTTTAACGACCAAGAATTAACACAATATATTACGGTCACATCCGATTTCCATTTATGGCAAGGAGCGGATTTTGACCCGCAGTTCAGTGATAACGACATTTTAAGCGGTTCTGAATTTTACTATACCAAATTCGGTAAGAAAGTAATTTCAGTGCCGTTTTTTAATTGCACAGCAACGTTCGAAGATTATAACCAGTTATTGCGCATTTTAAATGTCAAAGAACCAAAAGAACTTCGCTTTAGTAGCCGTCCTAATATTGTGTTCTACGCAATCCCAAGTGGAAAGTTAGACTACGAACGCATTACCCGCCACGCCGGTAAAGGTTCGATTGATTTTGTTATCGTTGATGGTTTGGGGCATTCAACTGCTACCCGCTCATTCAACTTTACTAAAAACGACTTCGGCGTATACGAAGCTGAAATTGTTAATGACGGCACCGAAGACGCATACGTCAGCTACGAAATCAAACTCAAGAAAGAGTCTGGCTACGTTGCGGTTACAAGTCCTTACGGCTTGCTGCAGTACGGTAAATACGACGAGGAAGACGGTTATATCGACCGCAAAAACGTCACTTTGCTAAGTAACCAGAAAGGCGACTTTGCCAACTGGACAGACGGAAATGTGTTTTACGAGAACCCAAACAAAATCGTAACAACGCAAATGTCATCAGACGCTGCTTTCGGCGGACGTCTCGGGCTTATGCCGTCAAGCTTTACAACAAGCGGAACTGTTGGAGCGTTTAGCTATGGTGCTTGTAAAGAGTACGTGCTAGAGACACCGGTCGAGCAATGGTACATCTGGGCGAGAGCGTGGTTCGAAACTGGTCTAGTGACTCAAAACGGTGAATGGTGTCTCGCGGTCATTGACGAAGATAACCATTTGTTAGCTGGTATGGCGATTGAGAAGAACGATAGAACACGCAACGAAGCTTACGTGCGTTTCTTGGTTGGTGACGGTAACGGCGGAAGTATGGTCAAGAAAGAAATCAAATTCACACCGTCATACTGGATTCCGCCCAACCCTTATGGCGCGCAGTCTATCGACCGCAATTCAAACATGTTTGACCTTGTCAAGGAGAAAGACCGTGTTCAGTTCTTTTGGTATGGCGGTTACCATCCATTTTCGGCTAGTCAATTAAATGGCAAGAAAGCGAAACGCATTCAGTTCTATGTCGGTAATTACGCAGGTTCAAACAGCACAACAGAGCAATTTGTAACACATCACTATTTAAATGATTTTAGTTTTAGTGAATTGCACGTTCCTTATTGGAAAGATGTACCGAATCGTTATCCAGACGGCGCTGTCATTGAGATTGACGGTGAAAAAGGTGAAATTCGTGTCAATAATCAAATCAAGAAAGACGATGAAATTTTTGGCACGACTTACTTCAAAGTACCACCCGGAACAACAAAAGTGCAATTGAATATGTCAAGTTTTGCTGAATTAGACTATGCAAAAGCGACAATCAAGGAGGTATATATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f720846b12fd586a922b771a2c5e01bd66821a166aead0018b30e5d040b2f8ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8702
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank