Protein

View in Explore
Genbank accession
QPB10144.1 [GenBank]
Protein name
central tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MLTNLIQGSKGGGGSPHVPVESPDSLHATSKAKVLLCLGHGPFIGTPTEDNIFLNGTPIKAPDGSMNFTGVRWVFRSGTQTQDPITEFPSVESETAVNTECKYNVPVTRALTNLQLTACRVRLGFPRMTFTQDNGDTVGTKVTYKIEVSTDGGPWQMMVDGVVEGKTTTLYPRQHRIALPKATRTGWQVRVTRTTPDATSQMVQDKFNFEVLTEVIDTKLRYPGLALLYLEFDAQQFPNGIPKVSVKIKGQECWIPSNYDPISRTYSGVWDGTLKRAWTDNPAWHAFEALRNSQWGLGLRVPAAITELSKWELYRIAQFADQQVPDGSGTPNKTEPRFLSNVYIQAQNSAFNVLRDLVAIFNGNTYWSGDRMMFVADMPTDPKRLLTNSNVVNGRFEYAFGDQKNRFSSVIVQYDDPNDHYATKTQPAQVAEMISRYGVNPNTLTAIGCTRASEAQRKGLYNIYTNADDMTCNCSVGRDGLVFRAGDVVRVADSFLSGRSDAGGRLVSAVIDAGSVLLTLDRVPMGTAGTTTVFYIHDANGVMQPYYFSAIGAAGRVRLNKHPQGPAVNVNNFAENATWVVEVPNLVAQQFKVLGLADNADGTYSVTMVKYNPSKQAAIDTGARLDQLPVTEIPPGWLAMPKNVTITAFDFVNQTQRNQTMRISWDAVDGAENYVIQWRKDSGDWINAGETSTLGTEVAGVYAGTYVARVRALNAWGVSSPWATSSPVALTGRTGAPEALLSFTTTPIIGGCHLSWSFDPATSPDTNYTELQFRDINSSVANPLFNVVYPGNAFDHMGLAPSTYFDYRARIVDKIGNVSAWSAWIRGQSSDDIGGYMDTITNDFLASEAGQALVEKIDMSGNAILENALANDADIQQRMVVEGNNRAQILEVRTTVSNQTQTLAELETLVSAQRDILDEQGQKVDQVSAAVDQKLTAVVNWDGSANAVYSIKTGVMWKGGYYDAGMSISATLDGNGIPQTSIGFKADRFVLINSNNGALASPFLVDGNNTYIRAAFIQDASITNAKIGNYIQSNNYHWDDDPNKRTGWAINKNGDAVFASAQVSGGIYAKWGVMDNVTINDTCVILGTLSANNIRGDIYVTRGDGWWLQKWNTGGGAYKRVSLFWVELYPDFERKLTINGVCRMMNYGGSGTGSWGKMWAGNQLLIDVPASGSWNASIDASDREFVLPRGNGGVEVYFEIQSGFNDRTDFYIQMGSWVDNNGRLNSWPPSGAQSRTIGGAMRVELTKNAAGPISDLPHNYNPIDV
Physico‐chemical
properties
protein length:1265 AA
molecular weight: 138287,30180 Da
isoelectric point:5,36153
aromaticity:0,09723
hydropathy:-0,27866

Domains

Domains [InterPro]
DC_0014
STR
1–1226
DC_0014
IPR053171
Unmapped
6–913
IPR053171 IPR015406
IPR055385
ATT
91–218
IPR055385 IPR032876 IPR013783
IPR003961
STR
640–734
IPR003961
IPR003961
STR
641–728
IPR003961
IPR036116
STR
656–732
IPR036116
QPB10144.1
1 1265
Architecture
STR
ATT
STR
ATT
STR
STR 1-90 | ATT 91-218 | STR 219-346 | ATT 347-499 | STR 500-1226 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB10144.1
1 1265
Domain Start End Length (AA) Confidence
N-terminal 1 151 151 0,7050
Central domain 152 354 204 0,0872
C-terminal 355 1265 910 0,2003
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-151
Central
152-354
C-terminal
355-1265

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS-Smarc4
[NCBI] 		2777234 Viruses >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB10144.1 [NCBI]
Genbank nucleotide accession
MT980833.1 [NCBI]
CDS location
range 22226 -> 26023
strand +
CDS
ATGTTGACTAATTTAATTCAAGGCTCCAAAGGTGGCGGCGGCTCACCACATGTTCCAGTCGAGTCGCCCGACTCGCTGCACGCGACGTCGAAAGCCAAGGTTTTGCTTTGCCTAGGTCACGGCCCGTTCATCGGCACGCCTACCGAAGATAATATTTTTCTGAACGGTACACCGATCAAAGCGCCAGATGGTTCGATGAACTTCACCGGCGTGCGTTGGGTATTCCGCAGCGGGACGCAGACGCAAGACCCAATCACCGAATTCCCGTCGGTCGAGTCTGAAACCGCCGTGAACACCGAATGCAAGTATAACGTGCCCGTCACTCGCGCGCTGACAAATTTGCAGCTTACCGCGTGTCGTGTTCGTCTCGGCTTCCCGCGCATGACGTTCACGCAGGACAACGGCGACACCGTAGGCACAAAGGTCACCTACAAAATCGAGGTAAGCACAGACGGCGGCCCGTGGCAGATGATGGTCGACGGCGTGGTAGAAGGTAAGACGACGACCCTTTACCCTCGGCAGCACCGGATCGCGTTGCCGAAGGCTACGCGCACCGGGTGGCAAGTCCGCGTCACGCGAACCACCCCGGACGCTACAAGCCAGATGGTTCAAGATAAATTCAACTTCGAAGTGTTGACCGAAGTCATCGACACTAAATTACGCTATCCGGGCCTCGCGTTGCTATACCTTGAATTCGACGCGCAACAGTTCCCGAACGGTATTCCGAAAGTGTCGGTGAAAATCAAAGGGCAAGAATGTTGGATTCCTTCGAACTACGATCCGATTTCGCGCACTTACTCCGGCGTGTGGGACGGTACGCTTAAACGTGCGTGGACAGATAACCCGGCGTGGCACGCATTCGAAGCGCTGCGAAATTCGCAATGGGGTTTAGGTTTGCGCGTACCCGCTGCGATCACCGAGTTGTCAAAATGGGAACTGTACCGCATCGCCCAATTCGCAGACCAACAAGTGCCGGATGGTTCAGGTACACCGAACAAGACTGAACCGCGTTTTTTATCTAACGTCTACATTCAGGCGCAAAACTCCGCGTTCAACGTGTTGCGCGATTTGGTCGCCATCTTCAACGGTAACACATATTGGTCGGGCGACCGCATGATGTTCGTTGCCGATATGCCCACCGACCCGAAACGACTGTTGACGAATTCGAACGTCGTGAACGGCCGATTCGAGTACGCATTCGGCGATCAAAAAAATCGGTTCTCGTCTGTCATCGTGCAGTACGACGACCCGAACGACCACTATGCGACGAAGACACAACCGGCGCAAGTAGCCGAGATGATTTCCCGCTATGGGGTGAATCCTAACACGCTGACGGCCATCGGCTGCACGCGCGCCAGTGAAGCGCAGCGCAAAGGGCTTTATAACATTTATACCAACGCCGACGATATGACGTGCAACTGTTCCGTCGGTCGCGACGGGCTGGTGTTCCGCGCCGGTGACGTTGTGCGGGTGGCGGACTCGTTCTTGTCCGGCCGCAGCGATGCAGGTGGTCGCCTCGTCTCGGCAGTCATCGACGCGGGTTCGGTGTTGTTGACCCTCGACCGCGTCCCGATGGGCACCGCAGGTACGACGACCGTTTTCTACATCCACGACGCGAACGGCGTCATGCAGCCGTACTACTTCAGCGCCATCGGCGCGGCCGGTCGGGTACGTCTGAACAAGCACCCGCAAGGCCCAGCGGTCAACGTGAACAACTTCGCCGAAAATGCAACGTGGGTTGTCGAGGTGCCGAACCTCGTCGCGCAACAGTTTAAAGTGTTGGGCCTAGCCGACAACGCCGACGGTACTTACTCGGTGACGATGGTGAAATATAATCCGTCGAAGCAAGCGGCCATCGACACCGGCGCGCGTCTCGACCAACTGCCAGTAACCGAAATCCCGCCGGGCTGGCTGGCGATGCCTAAGAACGTCACCATCACCGCATTCGACTTCGTGAACCAAACACAGCGCAATCAGACGATGCGCATTTCGTGGGATGCAGTCGACGGCGCTGAAAACTACGTTATCCAGTGGCGCAAAGACTCAGGCGACTGGATCAATGCGGGTGAAACGTCGACCCTCGGCACCGAAGTCGCTGGCGTCTACGCTGGCACCTACGTCGCCCGCGTTCGTGCGCTGAATGCGTGGGGCGTGTCGTCACCTTGGGCAACCTCGTCGCCTGTCGCGCTGACCGGCCGCACCGGCGCGCCTGAAGCGCTGTTGTCATTTACCACGACGCCAATCATCGGCGGGTGTCATCTGTCATGGTCGTTCGACCCTGCGACATCCCCGGATACCAACTACACAGAATTGCAATTCAGAGACATCAATTCTTCGGTTGCGAATCCGCTGTTCAATGTCGTCTACCCGGGCAACGCATTCGACCACATGGGCCTAGCCCCGTCGACGTATTTCGATTACCGCGCGCGCATCGTGGACAAGATCGGCAACGTTTCGGCGTGGTCGGCGTGGATTCGCGGGCAATCGAGTGACGACATCGGCGGTTACATGGACACCATCACAAACGATTTCCTCGCATCCGAAGCCGGGCAGGCGTTGGTCGAAAAAATCGATATGAGTGGCAATGCCATCCTAGAAAACGCCCTTGCCAACGATGCCGATATTCAGCAGCGCATGGTCGTCGAGGGGAACAATCGCGCGCAAATTCTCGAAGTGCGCACGACAGTCAGCAACCAAACGCAAACACTCGCCGAACTGGAAACGCTGGTAAGCGCGCAGCGTGATATTCTGGACGAACAAGGCCAGAAAGTCGATCAGGTAAGCGCGGCCGTTGACCAGAAATTAACGGCGGTTGTGAATTGGGACGGTAGTGCAAACGCGGTCTACTCCATCAAAACCGGCGTCATGTGGAAAGGGGGCTATTACGATGCCGGTATGTCGATTTCGGCGACGCTCGACGGTAACGGCATCCCGCAAACGTCCATCGGTTTCAAGGCCGACCGCTTCGTTCTGATTAACAGCAATAACGGCGCGCTGGCGTCACCGTTCCTCGTCGACGGTAATAATACATATATTCGTGCGGCGTTCATTCAAGATGCGTCTATCACCAACGCTAAGATCGGCAACTACATCCAATCAAATAATTATCATTGGGATGATGACCCGAATAAGCGAACAGGCTGGGCCATCAACAAGAACGGCGACGCCGTTTTCGCGAGTGCGCAAGTTTCCGGTGGTATCTATGCTAAATGGGGCGTGATGGATAACGTGACCATTAACGACACCTGCGTGATCCTTGGCACGCTGTCCGCAAACAATATCCGTGGTGATATCTATGTTACCCGGGGGGATGGTTGGTGGCTTCAGAAATGGAACACCGGCGGCGGCGCGTATAAAAGGGTTTCGCTATTTTGGGTTGAGTTGTACCCGGATTTCGAACGCAAGTTAACGATCAACGGCGTTTGTCGTATGATGAACTATGGCGGGTCAGGGACAGGTTCATGGGGTAAGATGTGGGCCGGTAACCAGCTGTTGATTGACGTTCCTGCCTCCGGCAGCTGGAACGCCAGCATCGACGCCAGCGATCGCGAATTCGTCTTACCGAGGGGCAACGGCGGCGTTGAAGTTTATTTCGAGATTCAATCCGGGTTTAATGACCGAACCGACTTCTATATTCAAATGGGGTCGTGGGTTGACAACAACGGCCGGTTAAACTCATGGCCTCCGAGCGGCGCGCAATCTCGAACAATCGGCGGGGCGATGCGCGTTGAATTGACGAAGAACGCGGCGGGGCCGATTAGCGACCTGCCACACAACTACAACCCAATCGACGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
71ced67c0a593d3f39793a6a50425e63cd1343da1a70cb7f58327856eee83b86
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7568
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50