Protein

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Genbank accession
QQG33482.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MEQELKRTTDLIGALQAAIRVAGYDMDGGDIWSHIKGIAAAEIKNHPGPVGPMGMAGAPGEPGKDAWDKYAYDPQTERKAQFFWKGIEFWSPVPRHFYDALPVGKELTYGDIGFIRTMYGNQIVETMAVFWRREYDLKTDMSLFINEEDKCHLANINKSDSSPAHLKV
Physico‐chemical
properties
protein length:168 AA
molecular weight: 18909,25880 Da
isoelectric point:5,51591
aromaticity:0,11310
hydropathy:-0,45952

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PcCB7V
[NCBI] 		2798043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG33482.1 [NCBI]
Genbank nucleotide accession
MW367417.1 [NCBI]
CDS location
range 95063 -> 95569
strand -
CDS
GTGGAGCAGGAGCTTAAAAGAACAACTGACTTGATTGGTGCCTTGCAGGCTGCTATCCGTGTCGCCGGGTATGATATGGACGGCGGAGATATCTGGTCCCACATAAAGGGTATCGCTGCTGCGGAAATAAAGAACCATCCTGGCCCTGTGGGACCTATGGGCATGGCTGGTGCCCCGGGAGAGCCGGGGAAGGATGCGTGGGATAAGTATGCCTACGACCCTCAGACCGAAAGAAAAGCCCAGTTCTTCTGGAAGGGTATTGAGTTTTGGTCTCCGGTGCCGCGCCACTTCTACGACGCCTTGCCTGTAGGGAAGGAGTTGACATATGGCGATATTGGCTTCATCCGTACAATGTACGGGAACCAAATCGTCGAAACTATGGCTGTCTTTTGGCGTCGTGAATACGACCTGAAGACCGATATGTCTTTGTTTATTAACGAGGAAGATAAATGTCATTTAGCGAATATCAACAAATCCGATTCATCTCCGGCCCATTTGAAGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e941c33dcc847099967660e13059de5e7aeda88666b248dbd1d66f6ba8f67259
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5149
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of novel berlinvirus and novel certrevirus lytic for Pectobacterium car. car Petrzik,K., Kmoch,P., Vacek,J. and Brazdova,S. 2021-04-29 — GenBank