Protein

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Genbank accession
WPK27853.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGFSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTNPSYPRLDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGWSFQAGTGWILINAPANDNIRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGAAINDVFFFRNRLGFLSGENVVMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGGYNIDTNLTTFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:730 AA
molecular weight: 80178,66090 Da
isoelectric point:5,15219
aromaticity:0,11507
hydropathy:-0,23534

Domains

Domains [InterPro]
IPR058003
TTP
3–730
IPR058003
WPK27853.1
1 730
Architecture
TTP
TTP 3-730
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK27853.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,9816
Central domain 58 256 200 0,3453
C-terminal 257 730 473 0,1954
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-256
C-terminal
257-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPstE
[NCBI] 		3053877 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. tomato
[NCBI] 		323 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group genomosp. 3

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK27853.1 [NCBI]
Genbank nucleotide accession
OQ953986 [NCBI]
CDS location
range 25654 -> 27846
strand +
CDS
GTGGGCTTCTCTGGGACCGGTCTGGCAGTCTGGGACCTGAAGGGTAACAACTACACCGTGCGTGGCTACAACGGTTACGCCAACTGCGCCAACCCTCGGACTGACCTGCGCCTCATCACCGTGGCAGACTACACCTTCGTGGTGAATCGGAACACCGTGTGCCAGATGGGATCGACCCTGACCAACCCTTCGTACCCAAGGCTGGACGGTCGAGCGATCATCAACGTGCGTGGTGGTCAGTACGGTCGAACCCTGTCGATCACAATCAACGGTGACGGCACTGGGTCCAGCCCTCAAGCGTCCATTAAGATGCCCAACGGTTCCGCCGAGAAGGTGCCCGCTGGTGACCCATACGCTGGCATGAACCAAGTGGACATGACAGATGCCTCATGGATTGCCGCTGAGCTGGCTCGGCAACTGACAGTCTCTCTGGGAGGCTCTGGGTGGTCGTTCCAAGCAGGCACCGGGTGGATTCTCATCAATGCCCCTGCCAACGACAACATCCGCCAGATCGCAACCAAGGACGGCTACGCTGACACCCTGCTCAGTGGGTTCATCTATCAGGTCCAGACCTTCACGAAGCTCCCTGCGAACGCCCCACCGGGTTACCTCGTGGAGATCACTGGTGAGTCTGCCCGTTCGGGTGACAACTACTGGGTCCAATACGACGCCTCTGGGAAGGTCTGGAAGGAGACGGCGAAGCCCAAGATCATCGCAGGGTTCAACAACGCAACGCTCCCACACGCGCTCGTGAGGGCCGCTGACGGGCAGTTCGACTGGACACCTCTGACGTGGGATGGACGCAACGCTGGTGACGATGACACGAACCCAATGCCGTCCTTCGTAGGCGCTGCGATCAACGACGTGTTCTTCTTCAGGAACCGTTTGGGTTTCCTCTCTGGTGAGAACGTCGTGATGTCTCGGACCTCGAAGTATTTCAACTTCTTCCCGAGCAGCGTGGCGACCCTGAGCGATGACGATCCAATCGACGTGGCTATCTCGCACAACCGTATCTCGATCCTGAAGTACGCTGTGCCGTTCTCTGAGCAGCTCCTGCTGTGGTCAGACCAAGCTCAGTTCGTTCTGTCGAGCAACGGTATCCTGTCGAGCAAGACCATCGAGCTGGACCTGACCACTGAGTTCGACGTGAGCGATGGTGCCCGACCTTATGGGATTGGTCGAGGGGTTTACTTCGCAGCTCCACGGGCATCCTTCACGTCCCTAAAACGGTACTACGCGATTCAGGATGTCTCTGACGTGAAGTCCGCTGAGGATGTCTCTGCGCACGTTCCGAGCTACATCACGAACACCGTCCACGCGATCCACGGGTCTGGTACTGAGAACTTTGTGAGCATCCTTTCGGACGGCTCGCCTAACAAGGTCTTCATCTACAAGTTCCTGTACCTCGACGAGATTCTCCAGCAGCAGTCCTTCAGTCACTGGGAGTTCGGCGATGCGGCCACAACCCGTGTCCTCGCAGCCTCGTGCATTGGCTCCTACTGCTACCTGATGATCGACCGACCAGAGGGACTGTGCCTTGAGCGTATGGAGTTCACGCAACACACCATCGACTATTCCATCGAGCCTTACCGGACCTACATGGACATGAAGAAGACCATCGTCCTCGGTGGCTACAACATCGACACGAACCTGACTACGTTCGACGTTCGGACTGCCTACGGTGGAACGCCGGGTCCTGAGTCAACGTTCTACACCATCGACCAGCAAGGGGTTCTCATCGAACACGAGGCGCGGGACTGGGCGACCAATCCGTACATCTCGTTCGTGGGCAACCGGGCTGGTGAGCAGATGGTGATTGGCAAGCAGTACACCTTCCAGTACGAGTTCAGCAAGTTCCTCATCAAGCAGACCGCTGACGATGGGTCCACCTCGACCGAGGACATTGGACGCTTGCAGCTTCGTCGTGCGTGGCTGAACTACGAGGAATCTGGTGCCTTCGAGATCAACGTCAACAACGGCTCCAGTGAGTTCGTCTACGTGATGACTGGTGGTCGCCTCGGGATTCAACGAGTCCTCGGTGAGTTGTCCGTGGGTACTGGTCAGTTCAAGTTCCCTGTGACCGGCAATGCCGTAAACCAACGAGTCACCATCACCAGCTCCAACCCGAACCCACTCAACGTGATCGGATGCGGCTGGGAGGGTAACTACATCCGCCGTTCTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
77b517aa38753a5c5b0a0461a81e8ba2ca8b6e216bd96364d51e45ccde51ebde
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8787
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50