Protein

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Genbank accession
QQO91895.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATWKKLVVSGSDISQLNNDAGYLTSVTAQTAFVTASFNGVHLIANNSEGQLNFASSSGQGLTISANAGTDTLTFGLAAIPNTSLANSTFNVGAGNGLTGGGSANLGGTSTVNVGAGTHITVNTDDIAVNESTLITAISGSIFSQVSGDVTIASNGVATIAANSVALGTDTTGDYVANLGTGTGVTIASNTGEGSAPTIAVNYGSTANTAVQGNTTISLTGTANEVQITGTTAQALGGAPSYTIGLPDNVTITTDLTVGGNLYVNGTTTQVNTAELFVEDKFIILASGSASAGDGGIIIDRGSDAAGNIAFGYDSATDRWGYQNGLTDTTNAITIGTDGDSAFAGYVFTEAAHTSAPTSGEFVAAGAIYTATSGDIFIYS
Physico‐chemical
properties
protein length:380 AA
molecular weight: 37511,24360 Da
isoelectric point:4,05003
aromaticity:0,06579
hydropathy:0,17211

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO91895.1
1 380
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,1519
Central domain 102 300 200 0,1816
C-terminal 301 380 79 0,9432
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-300
C-terminal
301-380

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage vB_FspM_immuto_2-6A
[NCBI] 		2801477 Uroviricota > Caudoviricetes > Immutovirus >
Host Flavobacterium sp. LMO8
[NCBI] 		2654244 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Flavobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO91895.1 [NCBI]
Genbank nucleotide accession
MW353175 [NCBI]
CDS location
range 136229 -> 137371
strand +
CDS
ATGGCAACTTGGAAAAAACTCGTCGTATCAGGGAGCGACATATCACAATTAAACAACGATGCAGGATACTTAACCTCAGTTACAGCTCAAACTGCTTTTGTAACAGCATCTTTTAACGGCGTACACCTTATAGCAAATAATTCAGAAGGGCAATTAAATTTTGCTTCTTCATCAGGACAAGGTTTAACTATTTCTGCAAACGCTGGAACAGATACATTAACATTCGGTTTAGCAGCTATTCCAAATACAAGTTTAGCAAATTCAACCTTTAACGTAGGGGCAGGAAACGGTCTTACGGGAGGAGGTTCTGCAAACTTAGGTGGAACTTCAACAGTTAATGTAGGAGCAGGTACTCACATTACTGTTAATACAGATGACATAGCTGTTAACGAATCAACATTAATAACAGCAATTTCTGGATCAATTTTCTCACAAGTAAGTGGAGATGTTACCATAGCATCAAACGGTGTTGCGACCATAGCAGCAAATTCAGTAGCATTAGGAACTGACACAACAGGCGATTATGTAGCTAACTTAGGAACAGGTACAGGTGTTACAATTGCATCAAACACAGGAGAAGGTTCAGCACCAACAATTGCAGTTAATTACGGTTCAACAGCAAATACAGCAGTACAAGGTAACACTACAATTTCGTTAACAGGAACAGCAAACGAAGTTCAAATAACAGGAACAACTGCACAAGCATTAGGAGGAGCACCTTCTTATACAATTGGATTACCGGACAATGTTACAATTACAACTGATTTAACAGTAGGAGGTAACTTATACGTAAACGGAACTACTACACAGGTAAATACAGCTGAATTATTTGTAGAAGATAAATTTATTATACTAGCTTCAGGATCAGCTTCGGCAGGAGACGGTGGTATTATTATTGATAGAGGATCAGATGCAGCAGGAAATATTGCTTTTGGATACGATAGTGCAACAGATAGATGGGGTTATCAAAACGGATTAACAGACACAACCAATGCAATTACAATTGGAACAGATGGAGATAGTGCTTTTGCAGGATATGTATTTACAGAAGCAGCACACACATCAGCACCAACATCAGGAGAATTTGTAGCAGCAGGAGCAATCTACACAGCAACATCAGGAGATATTTTCATATATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
589efd7b066a47b39c50b59f62dcda7aa7fa1a603a49581dd97a53e118cafc59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dynamics of Baltic Sea phages driven by environmental changes Hoetzinger,M., Nilsson,E. and Holmfeldt,K. — — GenBank