Protein

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Genbank accession
XDJ00357.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MPVVWHCGFNGIINNTMNIGQAGLFINTNDTTSVSHTLSNDNLINNIFGRGNGTQNGGLLPLINYYGRKWSSSAGYGSSYVFGRVKPSFFDNSVPCLSSEQSQPANQSDWFGGWQFRIDLCWPSAERLTTSWRMGFRIGRATHPTYQIPYQVFVCPAAINEANAQNLYAISVVAGQNEKYMEVEWIADTKTLNIYQDDELVSSRTNYTANDMSFGIILMCEHYVGGNTSSTPFFGFELRDMYIQKIVSDADQRLGSSTKVYAFNPVTDDVVQFSRPDGYSSNAAVAVTPIANGGVTPIPSVTAAILGADVVGQQDLYNIDISKVSSRLASVEAVNVRTMARNPLLGSRRVAAIAKSGATQTESENTSTLEQGGLWRFNTLQMVSDPADGSRWNLTKLAGLKVGTKFVA
Physico‐chemical
properties
protein length:408 AA
molecular weight: 44559,40460 Da
isoelectric point:5,85955
aromaticity:0,10294
hydropathy:-0,18799

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDJ00357.1
1 408
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,0039
Central domain 48 246 200 0,2021
C-terminal 247 408 161 0,9220
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-246
C-terminal
247-408

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT19
[NCBI] 		3229743 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ00357.1 [NCBI]
Genbank nucleotide accession
PP926506 [NCBI]
CDS location
range 36941 -> 38167
strand +
CDS
ATGCCTGTAGTTTGGCACTGCGGTTTTAATGGCATCATCAATAACACGATGAACATCGGTCAAGCGGGCCTGTTTATCAACACCAATGATACGACTTCGGTCAGCCATACGTTGTCCAATGATAACTTGATTAACAACATTTTCGGCAGGGGCAACGGCACGCAAAACGGCGGCTTACTCCCGTTGATCAACTATTACGGTCGCAAATGGTCATCGAGCGCTGGATATGGGTCATCCTATGTCTTCGGGCGCGTTAAGCCGTCATTCTTTGATAATTCCGTGCCGTGTCTTAGCTCTGAACAATCGCAACCCGCAAACCAATCGGACTGGTTTGGTGGGTGGCAGTTCCGTATTGATTTGTGCTGGCCGTCGGCGGAACGCCTGACGACGTCATGGCGTATGGGCTTTCGTATTGGTCGCGCAACACACCCGACGTATCAGATTCCTTATCAGGTCTTTGTCTGTCCGGCCGCGATTAATGAAGCGAACGCGCAAAACCTGTATGCGATTTCGGTGGTAGCAGGACAGAACGAAAAATACATGGAGGTGGAATGGATCGCCGACACCAAAACCCTCAACATCTATCAGGATGACGAGTTAGTTTCGTCCCGTACAAACTACACGGCTAACGACATGTCGTTCGGCATTATTTTGATGTGCGAACATTATGTTGGTGGTAACACTAGCTCTACCCCGTTCTTCGGTTTTGAACTGCGGGACATGTACATCCAGAAAATCGTTTCAGATGCAGATCAGCGCCTCGGGTCTTCGACGAAAGTATACGCGTTTAACCCTGTCACCGATGACGTCGTCCAGTTCTCGCGGCCAGACGGATATTCTTCAAACGCCGCCGTCGCAGTGACGCCAATCGCTAACGGAGGCGTTACCCCTATTCCGTCAGTTACGGCGGCCATCTTGGGGGCGGACGTGGTCGGACAGCAAGACCTGTATAACATCGACATTTCCAAAGTCAGTTCCCGCCTTGCCTCGGTTGAAGCGGTCAACGTCCGGACGATGGCCCGAAATCCGTTGCTGGGGAGTAGACGAGTCGCCGCGATCGCGAAGTCCGGGGCCACTCAAACCGAAAGCGAGAACACCTCGACGCTTGAACAAGGCGGCCTGTGGCGTTTCAATACGTTGCAAATGGTGTCCGACCCTGCGGACGGCTCGCGCTGGAACCTTACAAAACTGGCCGGGCTTAAAGTCGGTACCAAATTCGTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b768e3c634f2afd6e9bb72ee987dd5089941d452a7b672a6a848c2eee253306
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6193
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank