Protein

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Genbank accession
QFR58620.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MEVQGSLGRQIQGISQQPPAVRLDGQCTAMINMIPDVVNGTQSRMGTTHIAKILDAGTDDMATHHYRRGDGDEEYFFTLKKGQVPEIFDKYGRKCNVTSQDAPMTYLAEVINPREDVQFMTIADVTFMLNRRKVVKASNRKSSKVGNKAIVFCAYGQYGTSYSIIINGANAASFKTPDGGSAEQVEQIRTEHITSELYSKLQQWSGVGDYEIQRDGTSIFIERRDGASFTVTTTDGAKGKDLVAIKNKVSSTDLLPSRAPEGYKVQVWPTGSKPESRYWLEAEPKEGNLVSWQETVAADVLLGFDKGTMPYIIERTGIIDGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAGEAVIASRTSYFFDFFRYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGDKPLEKSNALLKPVTTFEVNNKVKPVATGESVMFATNDGAYSGVREFYTDSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYHNIIYCYDWLWQGTDRVQSAWHVWEWPLGTKVRGMFYSGELLYLLLERGNGVYLEKMDMGDALTYGLNDRIRMDRQAELIFQHFKAEDEWVSEPLPWVPTNPELLDCILIEGWDSYIGGSFLFKYNPGDNTLSTTFDMYDDNHVKAKVIVGQIYPQEFEPTPVVIRDNQDRVSYIDVPVVGLVHLNLDMYPDFSLEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLRAKSTDVVYRIIVESPHTFQLRDIEWEGSYNPTKRRV
Physico‐chemical
properties
protein length:800 AA
molecular weight: 90039,69950 Da
isoelectric point:5,33527
aromaticity:0,10500
hydropathy:-0,35100

Domains

Domains [InterPro]
IPR058003
TTP
3–799
IPR058003
QFR58620.1
1 800
Architecture
TTP
TTP 3-799 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFR58620.1
1 800
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9580
Central domain 142 355 215 0,1120
C-terminal 356 800 444 0,3251
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-355
C-terminal
356-800

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcolP_P433.1
[NCBI] 		2653657 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Rodentiumvirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFR58620.1 [NCBI]
Genbank nucleotide accession
MN384978 [NCBI]
CDS location
range 20205 -> 22607
strand -
CDS
ATGGAAGTACAAGGTTCATTAGGCAGACAAATCCAAGGGATTAGCCAGCAACCTCCAGCGGTACGCTTGGATGGTCAGTGTACGGCTATGATTAATATGATACCTGATGTGGTGAATGGCACGCAATCACGCATGGGTACAACTCATATTGCAAAGATACTTGATGCGGGTACTGATGATATGGCCACACACCATTATCGCAGAGGTGATGGTGATGAAGAGTATTTCTTCACATTGAAGAAAGGACAAGTCCCTGAGATATTCGATAAGTATGGGCGCAAATGCAATGTGACCTCACAAGATGCACCTATGACTTACTTGGCTGAGGTGATAAACCCAAGAGAAGATGTGCAATTTATGACGATAGCTGATGTTACTTTCATGCTTAACCGCAGGAAGGTAGTTAAAGCCAGTAACAGAAAGTCATCCAAAGTTGGAAACAAAGCCATTGTGTTTTGTGCATATGGTCAATACGGTACATCTTATTCCATTATAATTAATGGTGCCAACGCTGCTAGTTTTAAAACACCGGATGGTGGAAGCGCAGAGCAGGTTGAACAAATTCGAACGGAACATATCACTTCTGAATTGTACTCTAAGTTGCAGCAATGGAGTGGTGTTGGTGATTATGAAATACAAAGAGATGGTACAAGTATATTTATAGAAAGACGTGATGGTGCAAGTTTTACAGTAACAACCACCGATGGTGCAAAGGGAAAAGATCTAGTGGCTATCAAGAATAAGGTCAGCTCTACTGATCTCCTTCCTTCTCGTGCACCTGAAGGGTATAAAGTACAGGTGTGGCCCACTGGAAGCAAACCCGAGTCACGTTATTGGTTGGAAGCAGAGCCAAAAGAGGGCAATTTAGTATCTTGGCAAGAGACAGTTGCTGCTGACGTATTGCTTGGTTTTGATAAAGGCACTATGCCTTATATCATTGAGCGTACTGGCATTATTGATGGTATTGCTCAATTTAAGATTAGGCAAGGAGATTGGGAAGACCGCAAGGTAGGCGATGACCTCACTAACCCTATGCCATCTTTCATTGATGAAGAAGTTCCCCAGACAATTGGCGGGATGTTCATGGTGCAGAATCGTTTATGCTTTACAGCAGGTGAAGCTGTCATTGCATCACGCACTTCCTACTTCTTTGATTTCTTCCGTTACACGGTTATCTCGGCTTTGGCTACCGATCCATTCGATATCTTCTCAGATGCGAGTGAAGTTTACCAGTTGAAACATGCAGTGACCTTAGATGGTGCGACTGTGCTGTTCTCTGATAAATCTCAATTTATCTTGCCGGGAGATAAACCGCTGGAGAAGTCTAATGCCTTACTCAAACCTGTAACTACATTTGAGGTGAACAACAAAGTTAAGCCAGTTGCCACTGGTGAATCCGTAATGTTCGCTACAAATGATGGAGCCTACTCTGGTGTACGAGAGTTCTATACAGACTCTTATAGTGACACTAAGAAAGCACAGGCAATCACAAGCCATGTGAACAAGCTCATCGAAGGTAACATTACTAACATGGCAGCAAGCACCAATGTCAACAGACTGCTTGTCACTACAGATAAGTATCATAATATAATTTACTGTTATGATTGGTTATGGCAGGGCACAGACCGTGTTCAATCAGCTTGGCATGTGTGGGAGTGGCCTTTGGGTACAAAGGTGCGAGGTATGTTTTATTCTGGTGAATTACTTTACCTGCTCCTTGAGAGAGGTAATGGTGTCTATCTGGAGAAGATGGATATGGGTGATGCCTTGACCTATGGTTTGAATGACCGCATCCGAATGGACAGGCAGGCAGAGTTAATCTTCCAGCATTTCAAAGCAGAAGACGAATGGGTATCTGAACCACTCCCTTGGGTCCCTACTAACCCAGAACTCTTGGATTGCATCTTAATAGAAGGCTGGGATTCATATATTGGCGGCTCTTTCTTATTCAAATACAACCCCGGTGATAACACTTTATCTACAACTTTTGATATGTACGATGATAACCACGTAAAGGCAAAAGTCATTGTTGGTCAGATTTATCCTCAAGAGTTTGAACCTACACCTGTGGTTATTAGAGATAATCAAGACCGCGTATCTTATATTGATGTGCCAGTTGTGGGGTTGGTTCACCTTAACCTAGATATGTATCCAGACTTCTCATTGGAAGTTAAGAATGTGAAGAGTGGTAAAGTACGCAGGGTGTTAGCATCAAACCGCATAGGTGGCGCTCTCAACAATACAGTAGGTTATGTTGAACCAAGAGAGGGTGTCTTCAGATTCCCACTGAGAGCTAAGAGCACGGATGTTGTTTATCGTATTATTGTAGAGTCACCTCACACATTCCAGCTTCGTGATATTGAGTGGGAAGGAAGCTACAATCCAACCAAAAGGAGGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c642807d159f4ad45e147abe1a99d94c244f0eb750735418413989984336ca0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3018
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sus scorfa domesticus a preclinical model for human phage therapy Colom,J., Baig,A., Barrow,P. and Atterbury,R. 2020-09-07 — GenBank