Protein

View in Explore
Genbank accession
UFD97962.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSISSYPFDGQAVSEGQYSYLFRELASHSGVADSVAGTGFHTYGDSSGMQVKVNPGFAIVRGHAVQSTATETLTIAAASAAQRYDRIVLRLDPTANTITLAIVQGTSGGGVPALTQTDTGVYEFPLATVTVPVGTATIGSGNVTGERRFLGNTVGGWTTSTRPESPRTGRLGLNTSTNQWEFWDGTQWKDLAPTINWTTIEGRPANFTPTAHTHLWSEVTGKPTTFPPSSHNHDWDDITGKPSTYAPSTHSHTWASITSKPSTFTPSSHSHSGYLTSGSTIAWANGSKRPYSNSASGSDWYAVWVENGGDFCRNTSAAKFKKNIEDFPIDPDSVLKMRPVIYDRKDSVDEETGETKEGRKGEVGLIADEVDELGFNWMVNYMDGEVDGLRYDLLGVALIPVVQRQAAQIASLEARLSALEAQVSP
Physico‐chemical
properties
protein length:425 AA
molecular weight: 45751,88400 Da
isoelectric point:5,29770
aromaticity:0,09176
hydropathy:-0,39059

Domains

Domains [InterPro]
DC_1002
STR
1–327
DC_1002 Coil
DC_0203
RBD
290–425
DC_0203
IPR030392
CHP
316–373
IPR030392
IPR030392
CHP
316–416
IPR030392
UFD97962.1
1 425
Architecture
STR
RBD
STR 1-327 | RBD 328-425
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Pablito
[NCBI] 		2894593 Uroviricota > Caudoviricetes > Arquatrovirinae > Janusvirus pablito >
Host Streptomyces lividans
[NCBI] 		1916 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFD97962.1 [NCBI]
Genbank nucleotide accession
OK412919 [NCBI]
CDS location
range 19917 -> 21194
strand +
CDS
GTGTCCATCAGCTCTTACCCGTTCGACGGCCAGGCCGTCTCCGAGGGGCAGTACAGCTACCTCTTCAGAGAGCTCGCCTCTCACTCCGGCGTCGCCGACTCGGTGGCCGGCACCGGCTTCCACACCTACGGCGACAGCTCCGGGATGCAGGTCAAGGTCAACCCCGGCTTCGCGATCGTGCGCGGCCACGCCGTCCAGTCGACGGCGACCGAGACCCTGACCATCGCAGCCGCGAGCGCAGCTCAGCGGTACGACCGCATCGTGCTCCGCCTGGACCCGACGGCCAACACCATCACCCTCGCCATCGTGCAGGGCACCTCCGGTGGAGGCGTCCCCGCCCTGACGCAGACCGACACGGGCGTCTACGAGTTCCCGCTCGCGACCGTCACCGTCCCGGTCGGCACCGCGACCATCGGCTCGGGCAACGTCACGGGCGAGCGCCGCTTCCTCGGCAACACCGTGGGAGGCTGGACGACTTCGACCCGCCCTGAGAGCCCGCGCACTGGTCGGCTCGGCCTGAACACCTCCACGAATCAGTGGGAGTTCTGGGACGGGACGCAGTGGAAGGATCTCGCCCCGACGATCAACTGGACCACGATCGAGGGCAGGCCGGCGAACTTCACCCCGACCGCTCACACGCACCTGTGGTCCGAGGTCACTGGCAAGCCGACGACCTTCCCGCCCAGCTCGCACAACCACGACTGGGACGACATCACGGGCAAGCCCTCGACGTACGCCCCGTCGACCCACTCGCACACCTGGGCCTCGATCACCTCGAAGCCGTCCACCTTCACGCCGAGCTCGCACTCCCACTCCGGCTACCTCACGTCGGGAAGCACGATCGCCTGGGCCAACGGCTCCAAGCGCCCGTACAGCAACTCGGCCTCGGGCTCCGACTGGTACGCGGTGTGGGTGGAGAACGGCGGAGACTTCTGCCGCAACACCTCGGCCGCGAAGTTCAAGAAGAACATCGAGGACTTCCCGATCGACCCCGACTCGGTCCTGAAGATGCGGCCGGTCATCTACGACCGCAAGGACTCGGTCGACGAGGAGACCGGCGAGACCAAGGAGGGGCGCAAGGGCGAGGTCGGCCTGATCGCTGACGAGGTCGACGAGCTCGGCTTCAACTGGATGGTCAACTACATGGACGGCGAGGTTGACGGCCTCCGGTACGACCTCCTGGGCGTCGCCCTGATCCCCGTCGTCCAGCGCCAGGCCGCACAGATCGCCAGCCTGGAAGCCCGCCTGTCCGCCCTCGAAGCGCAGGTCTCCCCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad18e98e5b803863a0449f777fc5aad55591847a662270adf244b81885501bf1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7974
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage attack leads to shedding of the bacterial cell wall Ongenae,V., Claessen,D. and Briegel,A. 2022-06 — GenBank