Protein

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Genbank accession
WYX90318.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MISAGNASASNWVSMSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNNDGQLDPKGEAIKGINYNGVVALLVNAFKEQKAKIDNQQEEINVLRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:150 AA
molecular weight: 16695,59810 Da
isoelectric point:4,84822
aromaticity:0,06000
hydropathy:-0,40133

Domains

Domains [InterPro]
DC_0971
RBD
1–150
DC_0971
IPR030392
CHP
16–121
IPR030392
IPR030392
CHP
16–76
IPR030392 Coil
WYX90318.1
1 150
Architecture
RBD
RBD 1-150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage KKP_3822
[NCBI] 		3027681 Uroviricota > Caudoviricetes >
Host Salmonella enterica subsp. enterica serovar Manchester
[NCBI] 		915158 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYX90318.1 [NCBI]
Genbank nucleotide accession
OQ674104.1 [NCBI]
CDS location
range 36184 -> 36636
strand +
CDS
TTGATAAGTGCTGGAAATGCTAGCGCATCAAATTGGGTTAGCATGTCTGACATTAGATTGAAAGCACATCTAAAAGAGATCGAAACGGCATCCGACAAAATTGATTATCTAACTGGTTATACTTACTACAAGCGCAACAATCTAATTGAAGATGAAAACAGCGTTTATAGCATTGAGGCTGGATTGATCGCACAAGATGTTGAAAGGGTTTTGCCGGAAGCGGTTCATTCTTTGAATAATGATGGTCAGCTAGACCCAAAAGGCGAGGCAATCAAAGGCATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGCAAAGATTGATAATCAACAGGAGGAAATTAACGTATTACGCAATGAGTTATATGAACTGAAAAACCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
49084ddc1f26833ddcc3b39c7b0a598c55f15ca2bbeab3f57ccb8e3635eca417
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly Isolated Salmophages for Biocontrol of Salmonella in Ready-To-Eat Plant-Based Food Wojcicki,M., Swider,O., Srednicka,P., Ilczuk,T., Koperski,L., Shymialevich,D., Cieslak,H., Sokolowska,B. and Juszczuk-Kubiak,E. 2013 — GenBank