Protein

View in Explore
Genbank accession
XQQ52187.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRVGGAYESVARGVSEQAPQDRRSGQMWEQVNMISDPVRGIVRRQGSEYKSSIRIGASVKDVYQLEQVAPNFITKTYFCDGDEYELIYTRHKKSEREPLSPLYCYNKTKNKFLTVKPDNGAVWNAILNNGISSMVNVGKFMFISANGYTGEWQIKNSIPSDESSKSGAIWIRNGDYSRTYALLIVMQDGTQKKIEYKTPTSSYPGELDTSQVKVPEIKTDDNPSNEELNKRLAVFQQEMSEYNKKVADIQNEYNSAVTKYTGESAAAIQPENIAKQLRDQIVKVIPQQHVGQQGAYIYFSENAGIRSVSVEDMGDDSYLRVVVNNIDGPEKLTPKHYVGKIVRVTPKKQTGKDAYYLKAFPKSGMGSGFTDVTWREAAGQESVPKQFFALCYAVGDVLHVGSTPESLQSSVGSSVTIPKFKVSTVGDTTNSPLPSFFGKQIDYLGVFQDRLLIGTGAIIFASKPGDYFNWFRSSVLTVEDNDPVEMFALGSEDDTISWDTPFDRNHVLFGRKYQYLIPGRTLLSPKNPSIQVMSTNEDAVEAEPQSSGNFVFYAKDTARKGSLHQIQMGATADSSESYECSQQLDKYIWGKPTQLLCTTAPFVVVMRTRRYPYGLYLYTYLDSMQGTERLFDSWSRWEWNTKLGPSVGMSKYRGDVLVFTVRNSGNDLHLVCDLFTFDTSLSNYPYLDSWRHFNVATQYPLWWSKDFDDCMSVAYTALSKYYMLGSEYKKLDNNIPDWKQDIDKLTIGVEFPAYYTPTSPYKRDYNDKPVLNGRLTWQTILLSIMETGGVSVAVEFSNTMRIQKQFDGRTLGRGTNLVGRAPIVTTTVNAPVGREIRECKVTVAANKWLPLTVTGMEWTGQWFNRRRG
Physico‐chemical
properties
protein length:868 AA
molecular weight: 98001,35120 Da
isoelectric point:7,85214
aromaticity:0,11521
hydropathy:-0,47512

Domains

Domains [InterPro]
DC_0058
STR
1–868
DC_0058
IPR058003
TTP
7–55
IPR058003 IPR058003
Coil
Unmapped
225–259
Coil
XQQ52187.1
1 868
Architecture
STR
STR 1-868
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQQ52187.1
1 868
Domain Start End Length (AA) Confidence
N-terminal 1 162 162 0,8604
Central domain 163 361 200 0,2025
C-terminal 362 868 506 0,2403
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-162
Central
163-361
C-terminal
362-868

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sty_BCPSty_004
[NCBI] 		3413210 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ52187.1 [NCBI]
Genbank nucleotide accession
PV368565 [NCBI]
CDS location
range 14264 -> 16870
strand -
CDS
ATGCGAGTAGGTGGTGCTTATGAATCAGTAGCACGTGGTGTTTCAGAGCAAGCACCACAGGATAGACGCTCAGGTCAGATGTGGGAACAGGTAAACATGATTAGTGACCCTGTTCGCGGTATTGTACGTAGACAAGGTAGTGAATATAAATCATCTATTCGTATAGGTGCATCAGTAAAAGATGTGTATCAATTGGAGCAAGTAGCGCCTAACTTTATTACAAAGACGTACTTCTGTGATGGTGATGAGTATGAGTTAATTTACACTCGTCATAAGAAGTCAGAGCGTGAGCCACTATCTCCACTATATTGTTACAATAAAACTAAGAATAAATTCCTCACAGTTAAACCTGATAATGGTGCTGTATGGAATGCCATATTAAACAACGGTATTTCCAGCATGGTTAACGTCGGTAAGTTCATGTTTATATCAGCTAATGGTTATACTGGTGAGTGGCAGATTAAGAACTCCATACCGTCTGATGAATCATCTAAATCAGGTGCTATATGGATACGTAACGGTGATTACTCACGTACATATGCGTTACTCATTGTAATGCAAGATGGTACTCAGAAGAAGATTGAGTATAAGACACCAACATCAAGTTATCCCGGAGAGTTGGATACATCACAGGTTAAAGTACCGGAGATTAAGACTGATGACAACCCAAGTAATGAGGAGTTAAACAAACGTCTGGCTGTATTCCAGCAAGAGATGTCAGAGTACAATAAAAAGGTAGCTGACATTCAGAATGAGTATAACTCAGCTGTTACTAAGTACACAGGCGAATCAGCAGCTGCTATACAGCCTGAAAACATTGCTAAGCAACTACGTGACCAAATAGTTAAGGTTATTCCACAACAACATGTAGGACAGCAGGGTGCTTATATTTACTTCTCAGAGAATGCGGGTATACGTAGTGTATCTGTAGAAGATATGGGTGACGATAGTTATTTACGTGTTGTAGTAAATAATATTGATGGCCCTGAGAAGTTAACTCCTAAGCATTACGTCGGTAAAATTGTACGTGTTACACCTAAGAAACAAACAGGTAAAGATGCTTACTACTTAAAAGCATTTCCTAAATCAGGTATGGGTAGTGGTTTTACTGATGTTACATGGCGTGAAGCAGCTGGACAAGAGTCAGTTCCTAAGCAGTTCTTTGCATTGTGTTACGCAGTAGGTGATGTACTTCACGTTGGCTCTACTCCTGAATCTCTACAATCATCTGTAGGTAGTTCAGTTACGATACCTAAGTTTAAAGTATCTACTGTTGGTGACACAACAAATTCACCATTACCGTCTTTCTTTGGTAAACAGATTGATTACTTAGGTGTTTTCCAAGATAGACTACTGATTGGTACAGGTGCAATTATATTTGCTAGTAAGCCCGGAGACTACTTTAACTGGTTCCGTTCATCAGTGCTTACTGTAGAAGATAACGACCCTGTAGAGATGTTTGCTTTAGGTTCTGAAGATGACACTATATCGTGGGACACTCCGTTTGATAGGAACCATGTATTATTTGGTAGAAAGTACCAATACTTAATACCCGGACGTACATTACTATCACCGAAGAATCCTAGTATTCAGGTAATGTCTACTAATGAGGACGCTGTAGAAGCAGAGCCACAGAGTTCTGGTAACTTTGTGTTCTATGCTAAAGATACAGCTCGTAAAGGATCACTACATCAAATACAGATGGGTGCTACAGCGGATAGCTCAGAATCTTATGAGTGTTCACAACAATTAGATAAGTATATTTGGGGTAAGCCTACACAGCTGCTGTGTACAACAGCACCATTCGTTGTTGTTATGCGCACTCGCAGATATCCTTATGGTTTGTACTTATATACTTACTTGGATTCAATGCAAGGTACTGAGCGTTTATTTGATAGTTGGTCACGGTGGGAGTGGAACACTAAGTTAGGGCCGTCTGTAGGCATGTCTAAGTACAGAGGTGACGTTCTTGTGTTTACAGTACGTAACTCAGGTAATGATTTACACCTTGTATGTGACTTATTTACATTTGACACATCATTGTCTAATTACCCGTACTTGGATTCGTGGAGACACTTCAATGTAGCCACACAATATCCATTATGGTGGTCAAAAGACTTTGATGATTGTATGAGTGTAGCTTACACTGCTTTAAGTAAGTATTATATGTTAGGTAGTGAATATAAGAAGTTAGATAACAATATACCAGATTGGAAACAGGATATTGATAAGCTGACAATCGGGGTAGAGTTCCCTGCATATTATACACCTACTTCCCCATATAAACGTGACTACAATGATAAACCTGTTCTTAATGGTCGTTTAACTTGGCAAACTATTCTATTATCAATAATGGAAACTGGAGGCGTGTCAGTTGCTGTAGAGTTCAGTAACACTATGCGAATACAGAAACAGTTTGACGGACGTACATTAGGGAGAGGTACTAACTTAGTCGGTAGAGCACCTATCGTTACTACTACGGTTAACGCACCAGTAGGACGTGAAATTAGGGAGTGTAAAGTAACAGTGGCAGCTAACAAATGGTTGCCTTTAACTGTAACCGGTATGGAATGGACAGGACAATGGTTCAATAGACGCAGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e045c3b54fd652a662c2dc3d1396da48bfbf1e8502ebedb9facc9444f3bdfd0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2961
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Salmonella phage Tevdoradze,E., Chubinidze,S. and Golijashvili,R. 2023-02 — GenBank