Protein

Genbank accession
ALM63253.1 [GenBank]
Protein name
neck passage structure
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSLDNFRKRAIVWDTVNKDFPQPIQVMQGDVNARTLSVKIIDNGGEIDLTGHSLKLTYQYTNSSNSGFVMIPPENLTKGEFILVIPTEMTKPGVIEANLVLLNEDKEQVIVSKNLTFISDNSTVTDLAQEVNNKIDDFTKLLLENMPQVMRSELNDLHAQTESNTSNIELKANQTDLNNLQTTVNNQGITISTAAQETEVRSMISLLDNVKQTKKVARINLLLEQYKTSGYYRQYTNGEKLVNTDYDLFDMVPVNADTDYFTGISPNAHIAFYDFEQKYISGLLKPQPNFATPSSYLNTLVVKVPTKAKYMSYACNKNATQSVFYENDNPILDPSQPIFEGLLPFEQTANPPRGIKKVCNQNMFNKKLVVSGRYLDSTSGGLPHNANYNVYFMKVKPNTNYTTSGFVNNHDAFYDISGKFISSGNKSGTITTPANAFFWGISLTNAELPGAVICEGNVAKYSDFGTGAIFEVGDTAPQTLNVGADKKFTTIQAAVDFAKDGDTILISSGTYHEAVDAKTKLLHFKGVDKNTVTLEYENGAYSLPPLEISKGSVENMTIHAISQAQVSGEPGKAYCFHADYDIQIGHTLSFTNVKFINDDKQVIGVGLRNNFTLEFNSCDFFTPSGNNAFYVHDDPIRDNSSNQNLIVKDCSIVNNGTGATIHMQSQERVGAVAKVTWQRNIVVNLSGGKLIDVATYNNGLAKDKWLGSSDFVLQPTSALNNIPQLNFN
Physico‐chemical
properties
protein length:728 AA
molecular weight: 80407,33550 Da
isoelectric point:5,30913
aromaticity:0,09203
hydropathy:-0,32404

Domains

Domains [InterPro]
IPR018913
10–147
IPR018913 IPR012334
G3DSA:2.60.40.3350
11–125
G3DSA:2.60.40.3350 IPR011050
ALM63253.1
1 728
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 936 group phage Phi19.3
[NCBI] 		1636564 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALM63253.1 [NCBI]
Genbank nucleotide accession
KP793105 [NCBI]
CDS location
range 6862 -> 9048
strand +
CDS
ATGAGTTTAGATAATTTTAGAAAAAGAGCGATTGTATGGGATACGGTCAATAAAGACTTCCCACAACCAATTCAAGTAATGCAAGGCGACGTCAACGCTAGAACATTGTCAGTTAAAATAATTGATAATGGAGGCGAAATTGATTTGACTGGTCATTCATTAAAACTTACATATCAATATACTAATAGCAGTAATTCAGGCTTTGTTATGATTCCTCCTGAAAACTTAACTAAAGGAGAGTTTATTTTGGTAATTCCTACTGAAATGACAAAACCTGGAGTTATTGAAGCGAACTTGGTTCTTCTCAATGAAGATAAAGAGCAAGTTATCGTCAGTAAGAATTTAACATTTATATCAGATAATTCTACAGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGCAGTGAGTTGAATGATTTACATGCTCAAACTGAATCAAATACGAGCAATATTGAGCTTAAAGCTAATCAAACGGATTTAAATAACTTACAAACTACTGTTAATAATCAAGGTATTACAATTTCCACAGCTGCTCAAGAAACAGAAGTACGTTCGATGATTTCGCTTTTAGATAATGTAAAGCAAACGAAGAAAGTAGCACGTATCAATTTATTATTAGAACAATATAAAACAAGTGGATATTATCGTCAATACACAAATGGCGAAAAATTGGTCAATACTGACTATGACCTTTTCGACATGGTGCCAGTAAATGCTGATACTGACTACTTTACGGGTATTTCGCCAAATGCACATATTGCATTTTATGACTTTGAACAAAAATATATTTCTGGACTTTTAAAGCCTCAGCCTAACTTTGCAACACCTTCTTCATATTTAAATACATTAGTTGTAAAGGTTCCGACGAAGGCTAAGTACATGTCTTATGCGTGCAATAAAAATGCAACTCAATCAGTTTTTTACGAAAACGATAATCCTATTTTAGACCCTTCTCAGCCAATTTTTGAAGGTTTACTACCATTTGAGCAAACCGCAAACCCTCCGCGTGGTATTAAAAAAGTGTGTAATCAAAATATGTTTAACAAAAAATTAGTTGTATCTGGAAGATACTTAGATTCAACAAGTGGTGGACTACCTCATAATGCTAATTATAATGTTTATTTTATGAAAGTAAAACCAAACACAAATTATACAACAAGTGGATTTGTTAATAACCATGATGCCTTTTATGATATATCAGGTAAATTCATTTCATCTGGAAACAAAAGCGGAACAATTACAACACCAGCGAATGCTTTCTTTTGGGGTATATCATTGACTAATGCGGAATTGCCTGGGGCTGTTATCTGCGAGGGTAATGTTGCTAAATATAGTGATTTTGGCACAGGTGCCATATTTGAAGTTGGGGACACCGCCCCTCAAACTTTAAATGTTGGAGCTGATAAAAAATTTACTACCATTCAAGCTGCGGTTGATTTTGCAAAAGACGGTGATACTATCCTGATTTCTTCCGGAACTTATCATGAAGCAGTAGACGCCAAGACTAAGCTATTGCATTTTAAGGGTGTTGATAAAAATACGGTAACCCTAGAATACGAAAACGGAGCATACTCGTTGCCACCTTTGGAAATTTCTAAAGGAAGTGTTGAAAATATGACTATCCATGCAATCAGCCAAGCACAAGTTTCCGGAGAGCCTGGGAAAGCATATTGTTTCCACGCTGACTACGACATTCAAATTGGGCATACCTTGTCTTTTACAAATGTAAAATTCATTAATGATGATAAGCAAGTCATTGGCGTTGGATTGAGAAATAACTTTACTCTTGAATTTAATAGTTGTGATTTTTTTACACCGTCCGGAAACAATGCTTTTTATGTACATGATGACCCAATCCGCGACAATTCAAGTAATCAGAATTTGATCGTTAAAGACTGCTCAATCGTTAATAATGGAACTGGTGCGACTATCCACATGCAATCGCAAGAACGTGTCGGGGCAGTTGCTAAGGTAACGTGGCAGCGCAATATTGTTGTTAATTTGTCAGGTGGTAAATTAATCGACGTGGCAACTTATAACAATGGTTTAGCAAAAGATAAATGGCTCGGCTCGTCTGACTTCGTGTTACAACCAACTTCTGCGCTGAATAATATTCCTCAATTAAATTTTAATTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b36308314f40627e9caaefd829c0cc3b3ad6a32d933930787206757a7d25cf6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7004
Evidence 0,7004
Download PDB

Literature

Title Authors Date PMID Source
Comparative genomics and functional analysis of the 936 group of lactococcal Siphoviridae phages Murphy,J., Bottacini,F., Mahony,J., Kelleher,P., Neve,H., Zomer,A., Nauta,A. and van Sinderen,D. 2016 26892066 GenBank