Protein

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Genbank accession
QCS37180.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLSKSVLSFRPAFYFFYMYLRGFMSTQLSEKLGSNNSIFDVKEQPNIRLSAFNFSRKHNTTLDIGGIYPIDFFSVYPNDKVELNLRYMLDTLPLAVPPMTNYKIRTHWYFVKKSALWAGWNTFITGGRTGLDLKIPSLVNSFWGRKYSDISDFADAGIGEVTTSSLSGLPSYLGIPPRFGLNDSDGAHYLPFVRTSSTPENPTGVSARLNALPFMAYLKIFRHAYLPANLIQENKFWFPDNLDDHWRINYDASNLLPLGLFSGNGSPTDPRYSIVPKTSDNCADLTCLRYAPFDMDYFTSAKPWLVRGGTETSLSGDIDISELHIETTPGVNFVSLRRGAFMATPTGESKYLIQDGSGLCMTGPSAGAVSGSQMEVGIYMNSVASALGLYGSASSTLSLTANTLRNLMAVSVWQERNALTNGNYNLLVQSHWGIKPREPDYEPLYIGGTSDYVQFSNVIQTSQTSGRQVLGQSASIGGATSGADVFSYKVNDYGYIFGVMIISPEVSYSQGTSREFSDLNLEDQFTPEFASLGYQPIIKQELFTSTDGAVNDSLFGYQTRFAYLKQRLNRISGLLAISPEQDLMFSAYNQTRWFESSPRLSLEFCTMAPYNIRRDFMAFPEYPLFRAQIASDVKLIRALPYQSSPNTFGF
Physico‐chemical
properties
protein length:650 AA
molecular weight: 72503,00000 Da
isoelectric point:5,90093
aromaticity:0,13385
hydropathy:-0,18077

Domains

Domains [InterPro]
IPR037002
ATT
42–316
IPR037002 IPR037002
IPR016184
Unmapped
45–139
IPR016184 IPR016184
IPR003514
STR
47–153
IPR003514 IPR003514
QCS37180.1
1 650
Architecture
ATT
STR
ATT
ATT 42-316 | STR 317-372 | ATT 373-645 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCS37180.1
1 650
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1004
Central domain 11 200 191 0,0554
C-terminal 201 650 449 0,5214
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-200
C-terminal
201-650

Taxonomy

  Name Taxonomy ID Lineage
Phage Tortoise microvirus 65
[NCBI] 		2583171 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCS37180.1 [NCBI]
Genbank nucleotide accession
MK765617 [NCBI]
CDS location
range 1 -> 1953
strand +
CDS
ATGTTGAGTAAGTCGGTCTTATCTTTTAGACCGGCTTTTTATTTTTTTTATATGTATTTGAGAGGTTTTATGAGTACACAACTTTCCGAAAAACTTGGTTCTAATAATTCAATTTTTGATGTAAAAGAACAGCCTAATATAAGGCTTTCGGCTTTTAATTTTTCAAGAAAGCATAATACTACACTTGATATCGGTGGTATTTATCCTATCGATTTTTTTTCAGTTTATCCTAATGATAAGGTTGAACTTAATCTTCGGTATATGCTTGATACGCTTCCTTTAGCTGTTCCCCCTATGACTAATTACAAGATTCGTACGCATTGGTATTTTGTAAAGAAGTCTGCGCTTTGGGCTGGTTGGAATACTTTTATTACTGGTGGCCGTACCGGTTTGGATTTAAAAATCCCGTCTTTGGTGAATAGTTTTTGGGGGCGAAAATATTCTGACATTTCTGATTTTGCTGATGCAGGTATTGGTGAGGTGACGACTAGTTCGTTGAGTGGTTTGCCGTCTTATCTTGGTATACCACCGCGTTTCGGTTTAAATGATTCTGATGGAGCACATTATTTGCCTTTTGTTCGTACAAGTTCTACGCCTGAAAATCCCACTGGAGTTTCTGCGAGGCTGAATGCTTTGCCGTTTATGGCTTATTTGAAAATTTTTAGGCATGCTTATCTCCCAGCGAATTTGATTCAGGAGAATAAGTTTTGGTTTCCAGATAATCTTGATGATCATTGGCGTATTAATTATGACGCTTCTAATCTTCTTCCTTTGGGACTTTTTTCAGGGAATGGTTCTCCTACTGACCCTAGATACTCAATTGTACCTAAAACCTCTGATAACTGTGCTGATTTAACTTGTCTGCGTTATGCGCCCTTTGACATGGACTATTTTACAAGTGCTAAACCTTGGTTAGTCCGTGGCGGTACAGAAACTTCTTTGAGTGGTGATATTGATATTTCTGAACTACATATTGAGACTACTCCTGGTGTGAATTTTGTTTCACTTAGGAGAGGTGCTTTTATGGCAACGCCTACCGGTGAATCTAAGTATCTGATTCAGGATGGTAGTGGTTTGTGTATGACTGGACCGAGTGCAGGTGCTGTATCTGGTTCTCAGATGGAAGTTGGTATATACATGAATTCTGTTGCTAGTGCATTGGGTCTTTACGGTTCTGCTTCCAGTACTTTATCACTTACAGCTAATACTTTACGAAATCTGATGGCTGTTTCTGTTTGGCAAGAACGTAACGCGTTGACTAATGGTAATTATAATCTTTTGGTTCAGTCCCATTGGGGAATAAAACCTCGCGAGCCTGATTATGAACCGCTTTATATTGGTGGAACTTCTGATTACGTCCAATTTTCTAATGTTATACAGACTTCCCAGACTTCAGGACGCCAAGTTTTAGGTCAGTCAGCTTCCATTGGTGGCGCAACTTCTGGTGCAGATGTTTTTAGTTATAAGGTAAATGATTATGGCTATATCTTTGGAGTGATGATAATTTCTCCGGAAGTTTCGTATTCTCAAGGTACTTCACGAGAGTTTTCTGATTTGAATCTTGAAGACCAGTTTACCCCTGAGTTTGCTTCATTAGGATATCAACCTATTATCAAACAAGAGCTTTTTACAAGTACTGATGGTGCTGTTAATGATTCTCTTTTTGGGTACCAGACTAGATTTGCTTATTTGAAGCAACGTTTGAATAGAATTTCTGGTCTTTTAGCAATTTCTCCTGAACAAGATTTGATGTTTTCAGCGTATAACCAAACTCGCTGGTTTGAGTCTTCCCCACGCCTTTCTCTTGAGTTTTGCACTATGGCTCCTTATAACATACGTAGAGATTTTATGGCTTTCCCCGAATATCCTTTATTCCGTGCTCAAATTGCTAGTGATGTTAAGCTAATTCGTGCATTGCCGTATCAGTCATCACCCAATACTTTTGGATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
938cdd0ef8286973d5bdbbe579fb02a192ed97b5a7ae9d53562af2ebcf1f7d91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5026
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Microviruses associated with Mojave and Sonoran Desert tortoises Orton,J., Morales,M., Dolby,G.A., Schmidlin,K., Fontenele,R.S., Kraberger,S., Webster,T., Wilson,M., Kusumi,K. and Varsani,A. 2022-01-02 — GenBank