Protein

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Genbank accession
XVB76545.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MQFRLFNKPAAFDIENGKPTGKLWIDGYYDDYVSGEAYEGRVDIHGSVGLMTVKVLGGNIPPGATVTIDQLRKQVVVRWAAWSPPVQEVKEVLNGSFESDAYWEIVGPDTPARIETGWSPNGKGNLTYRDRKGDYTVRGQWAPVSSVNRLITLKGKVEHGKSSKGNASCAIGLAWYDENRNLVREDFGDPITNGGKGRWYDAQVQSASSDRNIKFVRPAIKFGRKKQNHPIHAGQITWDHAYVDGYDEDDILWVEVEVTDSIHNKAVHRGTIDITGTYMISQLYPWSITDSFGIGLPHGLRTSGKSASGADAATIGVPSGLRATYVTAIQKTTRVEDPPLIGMPSGIRSAYISVVVKHTQYQPESTHIGIPTGLKSSYTFDVKRAGSYDERIKATLPTISKVTYE
Physico‐chemical
properties
protein length:405 AA
molecular weight: 44637,58960 Da
isoelectric point:8,32669
aromaticity:0,09630
hydropathy:-0,44864

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB76545.1
1 405
Domain Start End Length (AA) Confidence
N-terminal 1 209 209 0,4299
Central domain 210 394 186 0,2088
C-terminal 395 405 10 0,0636
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-209
Central
210-394
C-terminal
395-405

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage BUCT799
[NCBI] 		3434656 Viruses >
Host Stenotrophomonas sp.
[NCBI] 		69392 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB76545.1 [NCBI]
Genbank nucleotide accession
PV714881.1 [NCBI]
CDS location
range 37601 -> 38818
strand -
CDS
ATGCAATTCCGTCTATTCAACAAGCCTGCTGCGTTTGACATCGAGAATGGCAAACCAACTGGTAAGCTGTGGATCGACGGGTACTACGATGACTACGTTTCTGGCGAAGCGTACGAGGGACGTGTGGACATTCATGGCTCCGTTGGACTCATGACTGTCAAGGTGTTGGGCGGTAACATTCCGCCCGGCGCTACCGTCACCATTGACCAGCTTCGTAAGCAGGTAGTGGTCCGGTGGGCCGCTTGGTCCCCGCCAGTGCAGGAAGTGAAGGAGGTCCTTAACGGGAGCTTTGAATCCGACGCGTATTGGGAAATCGTAGGACCTGACACACCGGCTCGCATCGAGACAGGCTGGTCACCTAATGGAAAGGGAAACCTGACGTATCGTGACCGCAAGGGAGACTACACCGTTCGCGGCCAATGGGCACCCGTGTCCAGCGTGAACCGACTGATCACCTTGAAAGGTAAGGTCGAACATGGTAAGTCCAGCAAGGGCAACGCGTCCTGTGCTATAGGCTTGGCATGGTACGATGAGAACCGGAACCTCGTGCGCGAGGACTTCGGCGATCCTATCACGAACGGCGGAAAGGGCCGCTGGTATGATGCGCAGGTGCAGAGTGCAAGCTCTGATCGGAACATTAAGTTCGTGCGGCCCGCAATCAAGTTCGGTCGCAAGAAGCAGAACCATCCGATCCATGCAGGACAGATCACGTGGGATCACGCGTACGTTGATGGGTACGACGAGGACGACATCCTGTGGGTTGAGGTAGAGGTTACCGACAGCATCCACAACAAGGCTGTTCATCGTGGTACCATCGACATCACCGGCACTTACATGATTTCCCAGCTGTACCCGTGGTCAATCACAGACTCATTTGGCATTGGTCTGCCGCACGGTCTGCGGACTTCTGGAAAGAGTGCTTCCGGAGCAGACGCAGCAACCATTGGCGTACCGTCAGGGCTGCGTGCCACCTACGTGACTGCAATTCAGAAGACTACACGTGTCGAAGACCCACCGCTTATTGGTATGCCGTCAGGAATCCGCTCCGCTTACATCTCTGTCGTGGTGAAGCATACCCAGTATCAGCCGGAGTCTACGCACATCGGAATTCCGACCGGGCTTAAGTCATCCTACACGTTCGATGTTAAGCGCGCAGGTTCGTACGATGAGCGCATCAAGGCAACCCTCCCGACTATTTCAAAGGTAACATACGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6ecd4199f9454512746dd054431b12a509bd028770ee06a9f9354e74d5d39b2f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6044
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50