Protein

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Genbank accession
AAY52889.1 [GenBank]
Protein name
gp108
RBP type
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MSRYDHSTVEYTDKIKDLTDSVNRVGNYLSGDNSPYDDVQKLKAITQNIKLTKDTGLAKSITAGTTALRSVVEVGVYYINSTEALALTDKPPELTGAFILVNYPTTASTSVKQEVHMFATGTTGSYVGYRWISASSVSSWWTYENTLGSQAKADKALADGKTYTDSSVNSALQAIQNSAQMYKLTADDGKPIDASAMATPPTSVASLTKTGIYYFTAAFGNTMPDTPCTGQPFWLVVLQHVTDNSISQSVTANTVEVERVVADRIITTLGVPSKWEYRAKASNFFFSASNSSRITLVSTQQNIITPNKFINNPDSLPLSAINPAITIPEDGMYQVMVTLNINGILEKVYLVSELTLLVNDVVHPATFGMVKTVDNANGQYSLAGNGIYQLKKGDKLKLRSYCNNTGNNPYLDVDKLYISVGKIADISLFK
Physico‐chemical
properties
protein length:430 AA
molecular weight: 46741,17460 Da
isoelectric point:6,12789
aromaticity:0,08837
hydropathy:-0,16372

Domains

Domains [InterPro]
DC_1285
ATT
1–158
DC_1285 IPR008983
DC_1773
STR
152–401
DC_1773
AAY52889.1
1 430
Architecture
ATT
STR
RBD
ATT 1-158 | STR 159-401 | RBD 402-415 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage A511
[NCBI] 		2908169 Uroviricota > Caudoviricetes > Herelleviridae > Pecentumvirus > Listeria phage A511
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAY52889.1 [NCBI]
Genbank nucleotide accession
DQ003638 [NCBI]
CDS location
range 73287 -> 74579
strand +
CDS
TTGTCTAGATACGACCATAGTACTGTAGAGTACACAGACAAAATTAAGGACTTAACAGATTCGGTAAACCGAGTAGGAAACTACTTATCAGGAGACAATAGCCCTTATGACGATGTTCAGAAATTAAAAGCAATTACACAAAATATTAAGCTAACTAAAGATACAGGTTTAGCTAAAAGCATTACAGCAGGAACAACTGCGTTGAGGTCAGTAGTCGAAGTAGGGGTTTACTATATTAATAGCACAGAAGCTCTAGCCCTAACTGATAAACCCCCAGAGCTAACAGGAGCCTTTATACTAGTAAACTACCCGACAACAGCCTCTACTTCTGTTAAGCAAGAAGTACACATGTTTGCTACAGGAACAACAGGTAGCTACGTAGGGTACCGATGGATTTCTGCTTCTAGTGTCAGCTCATGGTGGACTTATGAAAACACACTAGGTTCACAAGCTAAAGCAGATAAAGCATTAGCGGACGGGAAAACATATACTGATAGCTCAGTAAACTCCGCTTTGCAAGCAATTCAAAACTCAGCACAAATGTACAAGTTAACAGCGGATGATGGTAAGCCTATTGATGCTTCTGCTATGGCTACTCCACCAACTAGTGTAGCTTCTCTAACGAAGACAGGAATATATTACTTTACTGCCGCTTTTGGAAATACAATGCCAGATACCCCTTGCACAGGGCAACCATTCTGGTTGGTTGTTTTACAGCATGTAACAGATAACAGTATATCACAATCTGTGACAGCCAACACTGTAGAAGTAGAGAGGGTAGTCGCAGATAGGATTATTACTACTCTAGGGGTACCGAGTAAGTGGGAATACAGAGCTAAAGCCTCTAATTTCTTCTTTAGTGCTTCCAACTCGTCACGTATAACACTAGTATCGACCCAACAGAATATTATAACACCTAATAAATTTATTAATAACCCCGATAGTTTACCACTATCTGCGATAAACCCCGCAATAACTATTCCAGAAGATGGGATGTACCAAGTGATGGTGACCCTAAACATTAACGGTATTCTAGAAAAAGTGTACCTAGTAAGTGAGCTAACTCTACTAGTAAATGACGTAGTACACCCAGCTACGTTTGGGATGGTAAAAACAGTAGACAATGCTAATGGGCAGTACTCTTTAGCAGGGAATGGTATTTATCAACTAAAAAAAGGGGACAAGTTAAAACTAAGAAGTTATTGTAACAATACAGGAAATAACCCTTACTTGGATGTAGACAAACTTTATATATCTGTTGGTAAGATTGCAGACATTTCATTATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba53b9f7b1c622ef971616f651319e2b69ab3a110cfbd6aa7649042faff3a98c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8084
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The terminally redundant, nonpermuted genome of Listeria bacteriophage A511: a model for the SPO1-like myoviruses of gram-positive bacteria Klumpp,J., Dorscht,J., Lurz,R., Bielmann,R., Wieland,M., Zimmer,M., Calendar,R. and Loessner,M.J. 2008 18567664 GenBank