Protein

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Genbank accession
AXF38923.1 [GenBank]
Protein name
tail tubular protein A
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MPQYIPLNANDDLDAINDMLAAIGEPAVLQLDEGNADVSNAQRILHRVNRQVQAKGWNFNINEAAVLTPDVQDNRIRFLQSYLRVMTAGATSYYSNMGGYLYDLSTQSTTFTGPITVELVEMKPFAEMPVVFRDYIVTKASREFNAKFFGSPESELYLREQEAELYQQVMEYEMDTGRYNMMSDIGRD
Physico‐chemical
properties
protein length:188 AA
molecular weight: 21423,81760 Da
isoelectric point:4,46541
aromaticity:0,10638
hydropathy:-0,38032

Domains

Domains [InterPro]
IPR033767
TTP
13–179
IPR033767
AXF38923.1
1 188
Architecture
TTP
TTP 13-179 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Vec13
[NCBI] 		2783859 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Kayfunavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF38923.1 [NCBI]
Genbank nucleotide accession
MH400309.1 [NCBI]
CDS location
range 23316 -> 23882
strand +
CDS
ATGCCTCAATACATTCCACTGAATGCTAACGATGACTTAGACGCCATCAACGATATGTTAGCTGCTATCGGTGAACCAGCAGTCCTACAGCTTGACGAAGGTAACGCTGACGTCTCGAACGCTCAACGTATCCTGCATCGTGTTAATCGTCAGGTCCAAGCTAAAGGCTGGAACTTTAACATCAACGAAGCTGCTGTCCTGACGCCTGATGTCCAAGACAACAGGATTCGATTCCTGCAGTCTTACCTTCGGGTCATGACTGCTGGTGCTACCAGTTACTACAGCAACATGGGGGGCTATCTCTATGACCTGTCCACTCAGTCCACGACCTTCACTGGACCAATTACAGTCGAACTGGTGGAGATGAAACCGTTCGCTGAGATGCCTGTAGTATTCCGTGACTACATCGTTACCAAGGCTAGCCGTGAGTTCAACGCTAAGTTCTTCGGTAGCCCAGAGTCTGAACTGTACCTTCGTGAGCAGGAAGCAGAACTCTACCAGCAGGTGATGGAGTACGAGATGGACACTGGTCGCTACAACATGATGTCCGACATCGGGAGGGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b91903a748f9d9247f0c8431c170f3a3c27bb408045ff96cbb1136d8d5abab1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Escherichia coli bacteriophage Vec13 Volozhantsev,N., Kislichkina,A., Denisenko,E., Verevkin,V., Myakinina,V. and Krasilnikova,V. 2017-09-14 — GenBank