Protein

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UniProt accession
D9I6G0 [UniProt]
Protein name
Split RnlA RNA ligase 1 and tail fiber attachment catalyst
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MAKFDDYVIEHGLDSLYSNFKDVILPDMNEIEFFMDKADGSLVSTYLDNGRVRMKSKASIHSDQAIWANQYMDDWSHEALRFRVQELAEDGFTCNFEYVAPHNRVVLGYQDTRMILLNVRENESGNYVPYNELKSDPVLRKYLVPGYVIEEGQDPSAFVEGVYQMQNIEGYVFKMQSGLFFKVKTDWYSELHNVKASLNNNKALMMLARLGVLDDVRALFSDEYSLTKINKFEKTFLDFLMDSLKVIRELHKKYHGLSRKDYAIGSQTELTKLNKPYLFGLFMSLFNGMITTEALVESISEVFTKNVDLFIPEEYRDPIKT
Physico‐chemical
properties
protein length:321 AA
molecular weight: 37292,06730 Da
isoelectric point:5,14003
aromaticity:0,12773
hydropathy:-0,31713

Domains

Domains [InterPro]
IPR012648
Unmapped
19–315
IPR012648
IPR019039
STR
25–190
IPR019039 IPR049042
IPR019039
STR
34–186
IPR019039 G3DSA:1.10.3550.20
IPR049042
RBD
195–315
IPR049042
D9I6G0
1 321
Architecture
STR
RBD
STR 25-190 | RBD 191-315 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage 133
[NCBI] 		2919552 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Centumtrigintavirus
Host Acinetobacter johnsonii
[NCBI] 		40214 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADJ19541.1 [NCBI]
Genbank nucleotide accession
HM114315 [NCBI]
CDS location
range 132227 -> 133192
strand -
CDS
ATGGCAAAATTTGATGACTATGTGATTGAACATGGACTAGACTCGCTATATTCAAACTTTAAAGACGTTATATTACCGGACATGAATGAGATTGAATTCTTCATGGACAAAGCGGATGGGTCTTTAGTCTCTACGTATTTGGACAATGGTCGAGTGCGCATGAAATCAAAAGCCTCAATCCATAGTGATCAGGCAATCTGGGCGAACCAATATATGGATGATTGGTCCCATGAAGCACTACGTTTTCGCGTACAAGAATTAGCAGAAGATGGTTTCACATGTAACTTTGAATACGTTGCACCACATAATCGAGTCGTATTGGGCTATCAAGATACCCGCATGATTTTGTTAAATGTGCGTGAAAATGAATCTGGTAATTACGTTCCGTACAACGAACTTAAGTCGGATCCTGTACTGCGCAAGTACCTAGTGCCAGGTTATGTTATTGAAGAAGGACAAGATCCATCCGCATTTGTAGAAGGCGTGTATCAAATGCAAAACATTGAAGGCTACGTGTTCAAAATGCAATCTGGGTTGTTCTTCAAAGTGAAAACTGATTGGTATAGTGAACTGCATAATGTTAAAGCGTCACTGAACAATAACAAGGCTCTGATGATGTTGGCCCGACTAGGGGTCCTAGATGATGTACGCGCTCTGTTCAGTGATGAATATTCATTAACTAAAATCAATAAGTTTGAGAAGACATTCCTGGACTTTTTAATGGACAGTTTAAAAGTTATCCGTGAATTACACAAAAAATACCACGGTTTGTCACGTAAAGATTATGCTATCGGGTCTCAAACGGAATTAACTAAATTGAACAAACCGTACTTGTTTGGTCTGTTCATGTCCTTATTCAATGGAATGATTACAACCGAAGCATTAGTAGAATCCATCAGTGAAGTATTCACTAAAAATGTAGATCTGTTTATCCCGGAGGAGTATCGTGATCCAATTAAAACCTAG

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0005524 ATP binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0046872 metal ion binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0003972 RNA ligase (ATP) activity Molecular Function IEA:InterPro (UniProt)

Tertiary structure

PDB ID
cb1f3f373429b7227c8c2af0dae832a0e29f0c2f2d36e7a70b4799a52850e7ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50