Protein

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Genbank accession
UVD32143.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNIKTLPKELELKVMVNGEELTVVGKPIKAESLKSLVKTTHDLDFLNATSLSMEFRGSLADHNFYQGSVTTKYGSKLTVSFTDSKSKVVFKNDPAMGDKEVHLVLIGRNQLTCQGIMGYAVLESSQVEASYYIDKCFFHKSRVEGCRFQDSKFVESVVSVADESSIRKCEFQETTLDCDGYALIAKSLFWRSEISCSGYANIIEFDLIGSALTANSLMVNMTTKSRTIRDLCITVPGELTLFHPICYLTSLGEWINPFSIQMVMGRYERKNGYWVKLAGDPDGIKFFTEQDIEGRGIENYLYEALSPALEQPDEIVESIIDQHQSTIRNRIDLINLVSSSNRLLS
Physico‐chemical
properties
protein length:346 AA
molecular weight: 38840,91210 Da
isoelectric point:5,31771
aromaticity:0,08960
hydropathy:-0,14364

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVD32143.1
1 346
Domain Start End Length (AA) Confidence
N-terminal 1 162 162 0,0009
Central domain 163 335 174 0,0961
C-terminal 336 346 10 0,9946
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-162
Central
163-335
C-terminal
336-346

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phiKT1028
[NCBI] 		2972441 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD32143.1 [NCBI]
Genbank nucleotide accession
OP123707 [NCBI]
CDS location
range 81562 -> 82602
strand +
CDS
ATGTCTAATATCAAGACACTGCCTAAAGAACTCGAACTTAAAGTCATGGTCAACGGTGAAGAACTCACCGTCGTAGGAAAGCCGATAAAGGCTGAATCATTGAAGTCGTTGGTGAAAACCACGCATGATTTAGACTTTTTAAACGCCACTTCTTTGAGTATGGAATTTCGTGGCAGCTTGGCTGACCACAATTTCTATCAAGGTAGTGTCACTACGAAGTATGGGAGTAAGCTCACGGTCAGCTTCACGGATTCAAAATCAAAAGTGGTCTTTAAAAATGACCCGGCGATGGGTGATAAAGAAGTTCATCTCGTTTTAATTGGGCGAAACCAATTGACCTGTCAAGGGATAATGGGATACGCGGTTCTGGAGAGCAGTCAAGTTGAAGCATCGTATTACATCGATAAGTGTTTCTTCCACAAATCCCGAGTAGAAGGATGTCGATTCCAAGACTCCAAGTTTGTGGAGAGTGTTGTCTCTGTGGCAGATGAAAGTAGTATTAGGAAGTGTGAGTTCCAAGAGACAACCCTGGATTGTGACGGTTATGCACTCATCGCTAAATCATTGTTCTGGCGTTCGGAGATAAGCTGTAGTGGTTACGCCAACATCATTGAGTTTGACTTAATAGGTTCTGCCTTGACTGCGAATTCATTAATGGTGAACATGACCACGAAGTCTCGGACAATCAGAGATCTTTGTATCACGGTTCCTGGTGAATTAACCCTGTTCCACCCTATCTGTTATTTGACTTCCTTAGGGGAGTGGATCAACCCATTCTCAATCCAAATGGTAATGGGTCGTTATGAAAGAAAGAACGGGTACTGGGTGAAATTAGCGGGGGACCCTGATGGTATTAAGTTCTTTACAGAACAAGACATCGAGGGTCGCGGGATAGAAAACTACCTTTATGAAGCGTTATCACCAGCGTTAGAACAACCTGATGAGATCGTGGAGTCGATCATTGATCAACACCAATCAACGATCAGAAATCGGATAGATTTAATTAATTTAGTGTCGAGTTCAAATCGACTACTCAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5eb092bfd9256df03b25df99eb627e8a548fb61bea68bf364be4f52d8d080ad3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4975
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50