Protein

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Genbank accession
XZS41003.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLEKIQFLRSTVAGKTPTTSQLADGELAINMADYAIYTKNGSSIVQLAGKGIPETNTKKLTVDGPSALNDTVTVAEGKTITFTNENLSGEITRHIVGKCASNDGWYIGSGGTSNNGILEIGTIDDGTETIQFVQRGAGNVEARKLVLLDSSGNTTLPGDLRLSTNKTVKISNGSTLTLEMGVGANDVYIKNLRGSGVLQLTNDGNLSFRNYQVYYAMSGKGPGKDGTLLTNVENARQLEQDNFPISSGTEARWTKVALLKDPGSNQSRLQLMVTNGGNYGSTRGSIDFIDCSARNFPSTLTSANIRNHLQVRRIGDPGIDNTNQMRYSLVRTSEGLELWFMQRAFISSVKVALLSIAGDTQYYLPTGYTTSTTAPEGLVESVAIRIYDEINKPNLDNGTDGILSIAKGGTGASTADAARTNLGLGTAATRDVGEGAGNVLENGAYGLGGNGGKSINDIISNADMLTRLKSYGGTFWRGVTKSGVSVQNGLYSHGSGIFMNAGDTMSAINIDYASAKVRVYAANNAALAAGDVKYNELYGTANKPSKADVGLGNLTNDAQVKKAGDTMSGDLAAPNLHASGPGTASVYVNAGSGNAHVWFRTNANERGVIWATPNTTDLGQINIRAKTTEGVSAGDFSFRSDGRLDVPVAVKVGGAAILTKDGNITSGSMFGGNLNNYLNTIKNDITAGDNKQVSKTGDTMTGNLTINANLKVENPSGTFVDLGSENSDKYSRLTLARKVGSGATVAMLKITPEGYVQFGYQTAVSNPAPSKYILVKSSGLEVEGDLVFNQTYRGTEDAVDISDKTIDLNNMVIKGSDLGTRQLYKCFSGGGSNIANKPTSDGNFVLEVLSLRKISDSDWTCKQTFTTKSGGVEGTYVRYCNNGAWSAWKEVVAGVQPINLGGTGATSVAAARNNLGVGEGQSVKFGGLVVDGNINVASGNFVIAGQAPTDNSHLTNKKYVDDKVASAISNAGDTYLPLAGGTVTGRLTITGDQLKTTSLWVTGDAAVNGVLTVDGRARFNQEFIVSTSVNVQNTGNSHLVFRKADGTEKGLIWADEPGSVSIRAGGVSGPTWNFWNSGSCQFPGAISNFNGVNSTTNYPGGGSGAYLNTAGLTSRFSNGAYVSLYFQEYVGNYHQAILNVNGYGRDDNFYFRAGGDFFCTRNGSFDNVEIRSDRRAKSDIKVIENALEKVETLSGNTYELHNTSGGTTRSAGLIAQEVQEILPEAVTQDNEEDGGMLRLNYNSVIALLVESVKELSAEVKESKAKLK
Physico‐chemical
properties
protein length:1269 AA
molecular weight: 133941,18450 Da
isoelectric point:5,78259
aromaticity:0,07171
hydropathy:-0,29480

Domains

Domains [InterPro]
DC_1942
ATT
2–606
DC_1942 DC_0246
DC_1942
ATT
599–691
DC_1942 cd19958 IPR030392 Coil
IPR030392
CHP
1174–1268
IPR030392
XZS41003.1
1 1269
Architecture
ATT
RBD
STR
RBD
ATT 2-691 | RBD 757-806 | STR 807-893 | RBD 894-1269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZS41003.1
1 1269
Domain Start End Length (AA) Confidence
N-terminal 1 336 336 0,0668
Central domain 337 535 200 0,2849
C-terminal 536 1269 733 0,6793
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-336
Central
337-535
C-terminal
536-1269

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KleM_kp20
[NCBI] 		3234012 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella michiganensis
[NCBI] 		1134687 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZS41003.1 [NCBI]
Genbank nucleotide accession
PP993148.2 [NCBI]
CDS location
range 165405 -> 169214
strand +
CDS
ATGGCTGATTTAGAAAAAATTCAATTCCTACGTAGCACAGTTGCGGGGAAAACACCTACTACAAGTCAGCTTGCAGATGGTGAACTGGCGATCAACATGGCTGATTATGCCATTTACACGAAAAATGGTTCTTCGATCGTTCAGTTAGCGGGTAAAGGTATCCCAGAAACAAATACCAAAAAATTAACAGTTGATGGGCCTAGTGCTCTTAATGATACCGTTACCGTAGCGGAAGGTAAAACTATTACTTTCACCAACGAGAATTTAAGTGGTGAAATAACTCGTCATATCGTCGGTAAATGTGCCAGCAATGATGGATGGTACATCGGTTCCGGTGGTACAAGCAATAACGGCATTCTTGAAATCGGTACTATTGACGATGGTACTGAAACAATCCAGTTTGTACAACGCGGTGCTGGTAACGTAGAAGCCAGAAAATTAGTCTTACTTGATAGCTCTGGTAATACTACTCTTCCTGGGGATTTAAGATTATCCACTAATAAAACCGTTAAAATTAGTAATGGAAGCACTCTTACGTTAGAAATGGGTGTAGGAGCTAACGATGTCTATATTAAAAACTTGAGAGGCTCGGGTGTTCTTCAATTAACTAATGATGGTAATCTGTCGTTCAGAAATTACCAGGTTTATTATGCCATGAGTGGAAAAGGCCCTGGTAAAGATGGTACTCTTCTGACTAATGTAGAAAACGCGCGTCAGCTTGAGCAAGATAATTTCCCTATATCTTCAGGCACCGAAGCTCGGTGGACTAAAGTTGCTCTTTTAAAAGATCCTGGATCAAACCAGAGTCGCCTGCAACTGATGGTGACTAACGGCGGTAACTATGGTTCTACGCGTGGATCTATCGACTTTATCGATTGTAGCGCTAGAAACTTTCCATCCACTTTAACAAGCGCTAATATTCGTAATCATCTACAGGTTCGTCGAATCGGTGATCCTGGAATTGATAACACTAACCAAATGCGTTATAGTCTGGTTCGTACCTCTGAGGGTTTAGAACTGTGGTTTATGCAACGCGCATTCATTAGTAGTGTTAAAGTTGCTCTGCTGTCTATTGCTGGCGATACTCAGTATTATCTGCCTACTGGTTACACAACTTCTACAACTGCTCCGGAAGGTTTAGTTGAGAGTGTGGCTATTCGTATCTATGACGAAATTAATAAACCTAACCTTGACAATGGTACTGATGGTATTCTGTCTATTGCTAAAGGTGGTACAGGCGCAAGTACAGCGGATGCTGCTCGCACAAACTTAGGTTTGGGTACGGCTGCAACCCGTGATGTCGGCGAAGGTGCTGGTAATGTTTTAGAAAATGGCGCTTATGGCTTAGGCGGTAATGGTGGTAAATCCATCAACGACATTATCTCTAATGCGGATATGTTGACCCGCTTAAAATCATACGGCGGTACTTTCTGGCGTGGTGTTACTAAATCTGGTGTTAGCGTTCAAAATGGTCTTTATAGTCATGGCTCTGGTATTTTTATGAATGCTGGTGATACCATGTCAGCCATTAATATCGACTATGCTAGTGCTAAAGTTCGTGTATACGCGGCTAACAACGCGGCTCTTGCCGCAGGAGATGTCAAATACAACGAACTTTACGGTACAGCAAATAAACCGTCTAAGGCCGACGTAGGGCTTGGTAATCTGACAAATGACGCTCAGGTTAAAAAAGCCGGTGATACAATGTCTGGTGATTTAGCTGCACCTAACCTCCATGCTTCTGGGCCGGGAACCGCATCGGTGTATGTTAATGCAGGAAGCGGAAATGCTCATGTATGGTTTAGAACAAACGCCAATGAACGCGGTGTAATTTGGGCAACTCCAAATACTACGGACTTAGGACAAATTAACATTCGTGCAAAAACTACTGAAGGTGTTTCTGCTGGTGATTTTAGCTTCCGTTCTGATGGCCGCCTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGAGCAGCAATACTAACCAAAGACGGGAATATTACCTCTGGCTCGATGTTTGGTGGCAACCTTAATAACTATCTGAACACCATTAAAAATGATATCACTGCTGGCGATAATAAGCAAGTAAGCAAGACTGGCGACACCATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTTGAAAATCCTAGTGGGACGTTTGTTGATTTAGGTTCAGAGAACTCGGACAAGTACAGTAGATTAACCCTTGCTCGTAAAGTTGGTAGCGGTGCTACCGTAGCAATGCTTAAAATTACTCCTGAAGGATACGTGCAATTTGGTTATCAAACTGCGGTTTCTAATCCAGCTCCTAGTAAATATATTCTAGTTAAATCTAGCGGCCTTGAGGTAGAAGGGGACTTGGTTTTTAACCAGACATATCGTGGTACTGAAGACGCAGTTGATATTTCTGATAAGACTATTGACCTTAACAACATGGTTATTAAAGGCAGTGATTTAGGTACTCGTCAGCTGTATAAGTGCTTCTCTGGTGGTGGTTCTAATATAGCTAATAAACCCACATCTGATGGCAACTTTGTTCTTGAAGTTCTGTCTTTGCGTAAAATTTCTGATAGCGATTGGACATGTAAGCAGACCTTTACTACAAAGAGCGGTGGTGTTGAAGGTACATATGTTCGATACTGCAACAACGGAGCATGGTCTGCATGGAAAGAAGTTGTTGCTGGTGTACAACCGATTAATCTTGGTGGTACTGGAGCAACTTCTGTAGCTGCTGCTCGTAATAACCTCGGTGTTGGTGAAGGACAGAGCGTTAAGTTCGGCGGATTAGTTGTTGATGGAAACATCAACGTTGCTTCTGGTAATTTTGTTATTGCAGGCCAAGCTCCTACTGATAACTCGCATCTGACCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGCGACACGTATCTTCCGTTAGCAGGTGGTACTGTAACTGGGCGGTTAACAATTACAGGCGATCAGTTAAAGACTACATCGCTCTGGGTTACTGGAGATGCTGCTGTTAACGGTGTTTTAACTGTTGATGGAAGGGCTAGATTTAATCAAGAGTTCATTGTATCAACTTCGGTTAACGTCCAGAACACTGGTAACAGTCATTTGGTCTTCCGTAAAGCTGATGGTACAGAAAAAGGACTTATTTGGGCTGATGAGCCTGGTAGCGTTAGTATAAGAGCAGGTGGTGTCTCTGGGCCAACGTGGAACTTCTGGAACAGTGGTTCTTGCCAATTCCCAGGTGCTATTAGTAACTTTAATGGTGTTAATAGTACTACTAATTACCCTGGCGGCGGAAGTGGCGCGTATTTAAATACCGCTGGCTTAACAAGTAGATTTAGTAATGGTGCTTATGTTTCCTTATACTTCCAAGAATATGTAGGAAATTATCACCAGGCTATTCTTAATGTTAACGGCTATGGTCGAGATGACAATTTCTATTTCAGGGCTGGCGGCGACTTCTTCTGTACTCGCAACGGGTCATTCGATAACGTAGAGATTCGTTCTGACCGTAGAGCTAAATCTGATATTAAAGTTATTGAAAACGCTTTAGAAAAGGTTGAAACATTATCTGGTAATACTTATGAACTTCATAACACTTCTGGCGGTACTACTCGTTCTGCTGGGTTGATTGCTCAGGAAGTTCAAGAAATTCTTCCGGAAGCAGTTACTCAAGATAATGAAGAAGATGGCGGTATGCTTCGTCTGAATTATAACTCAGTAATTGCACTTCTCGTTGAATCTGTTAAAGAGCTTTCTGCCGAAGTTAAAGAATCTAAAGCAAAATTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9287176077bb320d50b609931f1ae19c650d6c9a1bec77facbfbee82e4eb86e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7250
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a Klebsiellaphage from environmental sample Samanta,J. and Datta,S. 1989-01 — GenBank