Protein

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Genbank accession
QHR72380.1 [GenBank]
Protein name
long tail fiber protein hinge connector
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAEFGQDYVQIPVLSENNAVSYKLSIAGSCTKSTKKAYIKFQDEDFGPQNFQSGLNLVEIDPTNNTIVATKSYAFTKDHDVISQAFITYISSIPAGRIVCFISSGKLNASQVLIDWFRAAGSAAFPDKWLIDKVDTSYSAFYVSGRNAIVMEHVLYNDGVLVEDVSTPLEVVYDNFNDVGGTGFPVRIVEDENTYYSGATQEIKRFPTEATITPCADYNMVPGDFFYLKFQMTYDQALKDLGTTQMSIRFFNGQEMLQSTDINIPVGAGSPPAGAWMSFERVVEVPLNASGFTLYARKTVLDGQGGVRNVVFGEIARPEDTPKSAEIGVNGIRMNFGTETRSMDNVIAQLNDKSSGNAGKVFVQEFKEKY
Physico‐chemical
properties
protein length:370 AA
molecular weight: 40785,37510 Da
isoelectric point:4,72897
aromaticity:0,11622
hydropathy:-0,17351

Domains

Domains [InterPro]
DC_0912
STR
1–370
DC_0912
PS52031
LEC
18–188
PS52031
IPR039477
STR
53–124
IPR039477
QHR72380.1
1 370
Architecture
STR
STR 1-370
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR72380.1
1 370
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,6180
Central domain 171 359 190 0,3905
C-terminal 360 370 10 0,9083
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-359
C-terminal
360-370

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage dhabil
[NCBI] 		2696390 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR72380.1 [NCBI]
Genbank nucleotide accession
MN850621 [NCBI]
CDS location
range 22332 -> 23444
strand +
CDS
ATGGCTGAATTTGGACAAGATTACGTTCAAATTCCTGTACTATCTGAAAATAATGCCGTTAGTTATAAACTTAGTATAGCAGGGAGCTGTACTAAGTCTACTAAAAAGGCTTATATTAAATTTCAAGATGAGGACTTCGGTCCTCAGAATTTCCAATCCGGGCTAAATTTGGTTGAAATAGACCCGACAAATAACACAATAGTGGCTACAAAATCATACGCCTTTACCAAAGACCATGATGTTATTTCCCAAGCGTTTATAACTTATATTTCTTCTATACCTGCCGGTAGAATTGTTTGCTTTATTTCTTCCGGCAAATTAAACGCCTCGCAAGTGTTAATTGATTGGTTTAGAGCTGCAGGGTCTGCGGCCTTTCCAGATAAATGGCTCATTGATAAAGTGGATACTTCTTATTCAGCTTTTTACGTTTCAGGAAGAAATGCCATTGTAATGGAGCACGTTCTTTATAACGACGGTGTTTTAGTTGAAGATGTTTCAACTCCGTTAGAAGTAGTTTATGATAATTTTAATGACGTAGGTGGGACAGGATTCCCGGTTAGAATTGTCGAAGATGAAAATACTTATTATAGTGGAGCTACCCAAGAAATTAAAAGGTTTCCTACTGAAGCCACTATAACTCCTTGTGCAGATTATAATATGGTTCCAGGAGATTTCTTTTATCTTAAATTCCAAATGACCTATGACCAGGCTTTAAAAGATTTAGGGACGACCCAGATGTCCATACGATTTTTTAATGGGCAAGAAATGCTTCAATCCACTGATATCAATATTCCTGTAGGAGCTGGCTCCCCACCGGCAGGCGCATGGATGTCCTTTGAGCGTGTAGTAGAAGTTCCATTAAATGCTAGTGGATTTACCTTATATGCCAGAAAAACTGTCCTAGACGGTCAAGGTGGTGTTAGAAATGTTGTGTTTGGTGAAATAGCTAGACCTGAAGATACTCCTAAATCCGCCGAAATTGGTGTTAACGGTATTCGTATGAACTTTGGTACAGAAACCCGTTCAATGGATAATGTTATTGCACAGTTGAATGATAAATCATCCGGTAATGCAGGTAAAGTATTTGTTCAAGAATTTAAAGAAAAATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c83c1d4a74da82852e442f0d188f2edebb7c01a1971627a829f0c64a471a0ef2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7311
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank