Protein

View in Explore
Genbank accession
QHR67358.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYRSTCESDRKDWGWYGLIAEEVGEIAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYDRLTVPLIHHVKKLKAENDEMRKEIDELKAVVAALVNKPTTLD
Physico‐chemical
properties
protein length:100 AA
molecular weight: 11355,77150 Da
isoelectric point:4,90989
aromaticity:0,07000
hydropathy:-0,47200

Domains

Domains [InterPro]
IPR030392
CHP
1–82
IPR030392
DC_0536
STR
2–100
DC_0536
Coil
Unmapped
68–95
Coil
QHR67358.1
1 100
Architecture
STR
STR 1-100
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ityhuna
[NCBI] 		2696410 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus ityhuna
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR67358.1 [NCBI]
Genbank nucleotide accession
MN850582.1 [NCBI]
CDS location
range 33020 -> 33322
strand -
CDS
GTGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGGCTAATCGCGGAAGAGGTTGGAGAAATTGCGCCGGAGTACGTTCACTGGCGACCGCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTAGCGGAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGCGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
584445ee0f2e3a422ff7a8fe48c0bdec65e648a443c22816bd42f2e46882dc50
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank