Protein

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Genbank accession
YP_010070077.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAIVGVPGWIGESAVNETGQRWMDAAMKAVRVSVPGWMSSMAGQSKEVYYSIGASNSYNKDTLINWIKAQGSTPVVITITGNIVSSSTGQPCLDFPSSLTNAYVTLNINSGVHVLGRGGNGGSNSAGRAGGTAINNGIGTRLRINNNGIIGGGGGGGAGARYNPFPQMDMIFGGGGGRPFGAAGAAGGGAAAASAGTISAPGKGTVSGVHHGGDGGDLGAAGKSSYIQGGTGGTIYSGGAAGKAVTGNAPTWTKVGTIYGARV
Physico‐chemical
properties
protein length:263 AA
molecular weight: 25640,26250 Da
isoelectric point:9,78825
aromaticity:0,06464
hydropathy:-0,03308

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_1679
STR
6–170
DC_1679
YP_010070077.1
1 263
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-170 | RBD 171-263
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_G50
[NCBI] 		2502303 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010070077.1 [NCBI]
Genbank nucleotide accession
NC_054917 [NCBI]
CDS location
range 157755 -> 158546
strand +
CDS
ATGGCAATTGTAGGTGTTCCTGGCTGGATTGGCGAATCTGCCGTGAATGAAACTGGACAACGTTGGATGGATGCTGCAATGAAAGCAGTTCGCGTTTCAGTTCCTGGTTGGATGAGCTCAATGGCTGGACAATCTAAAGAAGTATATTACAGTATTGGTGCTAGCAATTCTTATAATAAAGACACGCTAATAAATTGGATAAAAGCCCAAGGAAGCACTCCTGTTGTTATTACAATTACAGGCAATATCGTTTCTTCATCGACAGGTCAACCATGCTTAGATTTTCCTAGCTCATTAACTAATGCATACGTTACCTTAAACATTAATAGTGGGGTTCATGTATTAGGTCGGGGAGGAAATGGCGGAAGTAACTCTGCTGGTAGAGCAGGCGGAACTGCAATAAATAACGGAATTGGAACTCGTTTAAGAATAAACAATAATGGTATTATTGGCGGTGGCGGCGGTGGCGGCGCAGGCGCTAGATACAATCCTTTCCCTCAAATGGATATGATATTTGGCGGTGGCGGAGGTCGTCCATTTGGTGCAGCCGGTGCAGCTGGAGGCGGTGCCGCGGCAGCATCGGCTGGTACAATTTCTGCTCCTGGTAAAGGCACTGTTTCTGGGGTTCACCACGGAGGAGATGGTGGAGATTTGGGAGCTGCTGGCAAATCTTCATATATTCAAGGCGGTACTGGAGGAACTATTTACTCGGGTGGCGCTGCTGGTAAAGCTGTTACTGGAAACGCTCCAACTTGGACTAAAGTTGGTACAATATATGGTGCAAGGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5185ec4241c78bb998e171e6324f30ce0fc769dce97e156d44ae36b5422ba27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank