Protein

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Genbank accession
WPK38492.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPTLINRPFAQSGDVSVVPDASPSGYVNFQRGYTPDYALALEAGNVAAKAVERESMNWLLNLITDNLMFIQDHGAQQYFSSDLKPDGYPKNAIVVSNSGTPSAPEWRIFQSVVDGNTSAVPANGETESWQELTLPSEARKYIPMPAGGDAQNPYFVRGLISSFVDFDNITTSTTIVIQSDAVAALCSNIPNAVGATKVAGRLQVCAWQVDAQTFALQQYTSMNGYLFTRSYTSGAWSAWIQNATVQDVQIGTPNLASGKGAQDIILTVPAGYSWPPSAGSRLTIVNDVTTTGPVTVTIGVNKVAVLGFDGGELPAGAIVGLLPFTIIYDGTVWRLLQAFGAAQIGVDATEPQQFVTKRQLDALAAKLITMGDVFEVGETRFLTNGTDPNTKLGAYGQVWTRLPDNMVIRTSGAARNGLATGGADSVTLTAAMLPLHNHSVNITTRQSGPWSNTTGDAGNHNHTGDTSQNGAHVHGMDTAGNHHHDSSWGEANTSDARYGVYDGTHNNFGSRKGGDWDNYKYNTSTNGNHVHNIQSSGSHTHGLNINYAGNHSHGYTLPAHTHDVVGNTGNAGQSVPTAVSTLPRYVVLNGWYRSA
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63331,21610 Da
isoelectric point:5,68722
aromaticity:0,08571
hydropathy:-0,26672

Domains

Domains [InterPro]
DC_0930
STR
1–362
DC_0930
cd19958
STR
157–241
cd19958 DC_2084
WPK38492.1
1 595
Architecture
STR
STR 1-525 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV128
[NCBI] 		3077273 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK38492.1 [NCBI]
Genbank nucleotide accession
OR352958 [NCBI]
CDS location
range 40615 -> 42402
strand -
CDS
ATGCCAACACTTATTAACAGACCTTTCGCGCAAAGCGGTGATGTATCCGTGGTGCCGGATGCAAGCCCAAGCGGTTATGTGAACTTCCAGCGCGGCTACACCCCTGACTATGCGCTTGCGCTGGAGGCCGGAAACGTCGCCGCGAAGGCTGTTGAGCGCGAATCGATGAACTGGTTGCTGAATTTGATTACAGACAACCTTATGTTTATTCAAGATCATGGCGCTCAACAGTATTTCTCTTCTGACTTGAAGCCGGATGGATACCCGAAAAACGCCATTGTTGTCAGCAACTCTGGAACACCTTCAGCGCCTGAGTGGCGCATCTTTCAAAGCGTGGTCGACGGCAACACAAGCGCCGTACCAGCTAACGGAGAAACGGAATCTTGGCAGGAATTAACGCTGCCCAGCGAAGCGCGAAAATACATTCCGATGCCTGCCGGCGGCGATGCGCAAAACCCGTACTTCGTTCGCGGATTGATTTCAAGTTTTGTGGACTTCGATAATATTACGACTTCCACAACTATCGTCATTCAATCCGATGCCGTTGCCGCTTTGTGCTCTAATATTCCGAATGCGGTTGGCGCGACGAAGGTTGCAGGTCGCCTTCAGGTTTGCGCTTGGCAGGTCGATGCACAAACGTTTGCGCTGCAGCAATATACATCAATGAATGGCTATTTGTTTACTCGCTCTTACACTTCTGGTGCTTGGAGTGCTTGGATTCAAAATGCCACTGTTCAAGACGTGCAAATCGGAACTCCAAACCTTGCATCTGGTAAAGGCGCGCAAGATATAATCCTCACCGTTCCAGCAGGGTATTCATGGCCACCTTCTGCGGGTAGTCGTTTGACCATCGTCAATGACGTGACTACTACCGGACCTGTCACCGTGACCATTGGTGTAAACAAAGTTGCCGTTCTTGGATTCGACGGCGGCGAGTTACCAGCTGGCGCTATCGTAGGCTTGTTGCCATTCACCATCATTTATGACGGCACTGTTTGGCGTCTCCTTCAGGCGTTTGGCGCGGCGCAAATCGGCGTTGACGCTACTGAGCCGCAACAGTTTGTTACAAAGCGCCAACTCGATGCTTTGGCTGCGAAGTTGATCACTATGGGTGACGTATTCGAAGTAGGTGAGACTCGATTCCTGACCAACGGCACAGACCCAAATACTAAACTGGGCGCTTACGGTCAGGTATGGACACGACTGCCTGATAACATGGTTATCAGAACATCTGGAGCGGCGCGAAACGGTCTTGCCACTGGCGGCGCGGACTCTGTTACTCTCACCGCTGCAATGCTTCCTCTCCACAATCACAGCGTGAACATTACCACGCGACAAAGTGGTCCATGGTCCAATACAACTGGAGACGCAGGCAACCATAACCACACAGGTGATACAAGCCAAAACGGTGCTCACGTGCATGGAATGGATACGGCAGGCAACCATCACCATGACAGCAGCTGGGGTGAAGCCAATACTAGCGATGCGCGGTACGGCGTTTATGATGGGACGCACAACAACTTCGGTAGTCGAAAGGGCGGCGACTGGGACAACTACAAATACAACACCTCGACTAACGGCAACCACGTCCACAATATTCAATCCTCTGGGTCACACACTCATGGGTTGAATATAAATTATGCTGGCAATCACAGCCATGGCTATACCCTACCCGCTCACACTCACGATGTGGTCGGTAACACTGGCAATGCAGGACAGTCCGTTCCAACGGCTGTTTCAACTCTGCCGCGATATGTCGTCTTGAACGGCTGGTACAGAAGCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3bd7377f8e990b2faddb98a23df854a1973be194bcdcdbfc8823cde6233ed28
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank