Protein

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Genbank accession
QPZ53600.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAITKIPSAGFQDNVKFRNIIINGDMSIAQRSTSVSSLTSSSTYQTIDRYATELGSNGTWTQSQSTDVPTGQGFAKSLKMDCTSTGSGGYLHITQRFEGQNLQYLKKGTSSAESLTLSFWVKSAKTGTYIAEFRDIDNTRNISKSYSISSADTWEKKTITFPGDTSGAFGNDNGSSLELNLWLAAGSGNTSGTLQTNWGSQVAANRAVGQVNLGDSTSNDWYITGIQLEAGTSASDFEFLPNDINKNRCYRYFQKLSVVLMNFNTTGLLGFVFPVEMRANPSVSRSYAGNANRMYNVGTAATADVVSPITIVSNKTIRYWYAFSPSAWAGTSRAGWETEYSIDSEL
Physico‐chemical
properties
protein length:346 AA
molecular weight: 37613,10720 Da
isoelectric point:6,61699
aromaticity:0,10983
hydropathy:-0,35954

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC100P
[NCBI] 		2796522 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53600.1 [NCBI]
Genbank nucleotide accession
MW273924.1 [NCBI]
CDS location
range 12903 -> 13943
strand -
CDS
ATGGCAATAACAAAAATACCAAGTGCTGGATTTCAAGACAATGTTAAGTTCAGAAACATCATCATCAATGGAGATATGAGTATTGCTCAAAGATCGACTTCTGTTTCTTCTTTAACTTCAAGTAGCACATATCAAACAATAGACAGATATGCTACCGAATTAGGAAGCAATGGAACTTGGACACAATCTCAATCAACAGATGTTCCAACTGGTCAAGGTTTTGCTAAGTCTTTAAAAATGGATTGCACATCAACAGGAAGTGGAGGCTATCTTCACATAACACAAAGATTTGAAGGTCAAAATTTACAATATCTTAAAAAAGGAACTTCAAGTGCTGAAAGTTTAACTTTATCTTTTTGGGTTAAATCTGCAAAAACTGGAACTTATATTGCTGAATTTAGAGATATAGATAACACTAGAAATATCTCAAAGTCTTACTCAATCTCATCTGCTGATACTTGGGAGAAAAAAACTATAACTTTTCCAGGAGATACTTCTGGTGCTTTTGGCAATGACAATGGAAGTAGTTTAGAATTAAATTTATGGTTAGCTGCTGGAAGTGGTAACACATCTGGAACTTTACAAACAAACTGGGGTTCTCAAGTAGCTGCAAATAGAGCAGTTGGTCAAGTCAATCTTGGAGATAGCACATCAAATGATTGGTATATTACAGGAATACAATTAGAAGCTGGAACATCAGCATCTGATTTTGAGTTCTTGCCAAATGATATAAATAAAAATAGATGTTATAGATACTTTCAAAAACTAAGTGTTGTATTAATGAATTTTAACACAACAGGATTATTAGGATTTGTTTTTCCAGTAGAAATGAGAGCAAACCCAAGTGTAAGTAGGTCATATGCTGGTAATGCAAATAGAATGTATAATGTCGGAACTGCAGCAACAGCAGATGTCGTATCACCTATAACAATAGTCAGTAATAAAACAATTAGATATTGGTATGCGTTTTCTCCTAGTGCGTGGGCTGGTACTTCGAGAGCAGGTTGGGAAACAGAGTATTCAATAGATTCGGAGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d5d133d16be6b47845a601b3cafa527f0355a6a86a3352f0b4f20fd015b8c0e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank