Protein

View in Explore
UniProt accession
A0A8S5USZ1 [UniProt]
Protein name
Virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSDNNIPVNQPVYGRGVAANVSIVGIDGEPPILDDTQVWREWALHDIYLGKEGRRKYVPKVNDFVRDINTLTRYKVIAVDQTTLIPELEEVSSKTASDEMTRDEGRFFAGGTLATPCARQIFYDDSVVRPTLTVPAQFHIQGSMPHHAIAFKGTVAGAGGLPISVRYDSSFNIVGNEIPLEPIQQRDANNHTQWFLPPFYSAHKLEEGEMILILIYDDKGGLLSRTNFIVEKSALLRDVSDADKFVSAISLESAYIDAKDESNLLIPEQVLKNSINLMGKVHYTDGTTVTYPVDGNKFDLLYLDRASESTVGVRGVLVLKYYLGPNEKSVNVINNNNRYFITRSFNYTITERDGAYSVKLYPIPRWVNDTIGYQLDWYLFTLDRNQWLDVTNDVYITSNSPSRSLNGKLYGPNQQLNVAIDLGVLNNTFREHIHPQQVDIRLLRNAGDNTADRWLIGFEAYQNPPYGENLICNVRIMSGTNYHYNFANNCSDIEEWFRKVYYSTLPQYRTNRENQAPKPNMFKLLVEGQEHEFPISMWNRDLSVPTRCTNTSTVSLVFFTRYNNNDVFYSMAPFPVVIS
Physico‐chemical
properties
protein length:579 AA
molecular weight: 65897,36970 Da
isoelectric point:5,41792
aromaticity:0,11226
hydropathy:-0,35579

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5USZ1
1 579
Domain Start End Length (AA) Confidence
N-terminal 1 384 384 0,5427
Central domain 385 568 185 0,6017
C-terminal 569 579 10 0,9225
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-384
Central
385-568
C-terminal
569-579

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctijX18
[NCBI] 		2825154 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF97530.1 [NCBI]
Genbank nucleotide accession
BK016133 [NCBI]
CDS location
range 44635 -> 46374
strand +
CDS
GTGAGTGATAACAATATTCCCGTGAACCAACCCGTATACGGTCGTGGTGTAGCTGCGAACGTGTCGATTGTCGGGATAGATGGTGAGCCCCCTATCTTAGATGACACTCAGGTCTGGCGAGAGTGGGCACTACACGACATCTACCTAGGTAAAGAAGGTCGTCGTAAGTACGTCCCTAAAGTCAACGACTTTGTACGAGACATTAATACTTTGACTCGTTATAAAGTCATCGCAGTGGATCAAACCACTTTGATTCCTGAATTAGAAGAAGTCTCTTCTAAAACCGCTTCCGATGAGATGACTCGTGATGAAGGTCGATTCTTTGCAGGTGGTACACTAGCTACACCTTGTGCTCGACAAATCTTCTACGATGATTCTGTTGTTCGTCCTACATTGACTGTACCCGCACAGTTCCACATCCAAGGCTCTATGCCACATCATGCGATTGCATTTAAAGGAACCGTAGCAGGAGCAGGTGGATTACCTATTTCTGTACGATACGATTCTAGCTTTAATATCGTGGGTAATGAGATCCCATTAGAACCCATTCAACAGCGTGATGCCAATAATCACACCCAGTGGTTCTTACCGCCTTTCTATTCAGCTCACAAGCTCGAAGAAGGCGAAATGATCTTAATCCTGATTTACGATGATAAAGGTGGTTTACTTTCTCGTACTAACTTTATTGTAGAGAAATCTGCTTTATTGAGAGATGTGTCTGATGCGGATAAATTTGTATCAGCTATTTCTCTAGAGTCTGCTTACATTGATGCCAAAGACGAATCGAATCTTTTGATTCCTGAACAAGTCTTGAAGAACTCGATTAACTTAATGGGTAAAGTACACTATACCGATGGTACTACAGTGACTTATCCAGTAGATGGCAATAAGTTTGATTTACTCTACTTAGATCGTGCTTCAGAATCCACCGTAGGTGTACGTGGTGTACTGGTATTGAAATACTACTTAGGCCCTAATGAAAAGTCAGTAAACGTTATTAACAACAATAACCGTTACTTCATTACTCGTAGTTTCAACTATACCATTACTGAACGTGATGGTGCTTACTCTGTGAAACTTTATCCAATTCCACGTTGGGTAAACGACACGATTGGTTATCAATTAGACTGGTATCTCTTTACCTTAGATCGTAACCAATGGTTGGATGTGACTAACGATGTGTATATTACTTCTAACTCACCTTCTCGTTCACTGAATGGTAAACTCTATGGTCCTAACCAACAATTGAACGTAGCGATTGATTTAGGTGTATTGAACAATACCTTCCGTGAACACATTCATCCACAACAAGTCGATATTCGTTTACTGCGTAATGCAGGAGATAACACAGCAGATCGTTGGTTGATTGGTTTCGAAGCGTATCAGAATCCGCCTTATGGTGAAAACCTGATTTGTAATGTACGAATCATGTCTGGTACGAACTACCATTATAACTTTGCCAATAACTGCTCGGATATTGAAGAATGGTTTAGAAAAGTCTACTATTCTACCTTGCCGCAATATCGGACAAATCGTGAAAACCAAGCACCGAAACCTAACATGTTTAAATTGTTAGTAGAAGGTCAAGAACACGAGTTCCCGATTAGCATGTGGAATCGGGATCTTTCTGTACCGACTCGCTGTACTAATACCTCTACTGTATCGTTAGTATTCTTTACTCGATACAACAACAATGATGTATTCTACAGCATGGCTCCATTCCCAGTAGTCATTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5b8bba2c25a8135ae932255202c0f82f8adccfe830d209aee4a371719dc2e94
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8099
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50