Protein

Genbank accession
AXC34345.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDIVFSAVRMPSSPFIQVGKFAPISGGDIYIGKPDTNPKDPANQVQVYLENEDLTLVPVPQPIKINQSGYPEYNGIVGRFVTQTASSMDVYDRNDVLQYSFDNLLEYDAAQMWKVIGSSTGWEYVGTPEGTLKTKLQGFVTPFDFVGREEYTSVSQAIQAMFDYAKANGKIVNAYGWSGTLESTVNPNGITIMGGTWKGTADFRLTDTLIEGAVINNLRIMHYGGDVRIRDCMFDGKPTTSKVASIMMQGVPVDGSTIEVSDSEFRNGLYGILQQGTGSTVVSGVYRNLSFYDMGGDGIELNVVQRHYDNGCLIDGIFLDNIDSTGQAPITPSNWGIGIGVAGQSPYGIDTPDANFAKNITIRNVYANKVRQIVHFEMVRDSVVENIHGDPNQNVSNGSGLTVATVLFYGSRRCSIDGVYGEPVVTGSTLAQDVRVIMLEWGTNAGVGARGPCHDMAIRNVYSKTGRFYAGIGTEKAGATNTYYIENVNVAKFSLFGVATELNMSNVHCRIFDCVGDDSSGGTASNGYLATGRTILRMVNVNATDVNGYGDQGWSRCAYSHIESVGSNVFARPYPRQGIDGGIGAKMTASNHTYIIPSPADMNATGIWDGNAFPTGREFMEGDLVVRNDGKIFVVTASGAYIPAIDEFKIKATTVGSFSIASNFPLGGNNGDMVWIYKTPLSPGCRIVIPGAGEGGNPLSTWITRGPYRVNVNDPTSEIRIDIAHAIQTATPAGTQLAAAKVVSFRTPT
Physico‐chemical
properties
protein length:750 AA
molecular weight: 80684,68640 Da
isoelectric point:5,12576
aromaticity:0,09467
hydropathy:-0,14307

Domains

Domains [InterPro]
IPR009093
1–111
IPR009093 IPR011050
IPR036730
3–110
IPR036730
IPR036730
9–107
IPR036730
AXC34345.1
1 750
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage C130_2
[NCBI] 		2234093 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC34345.1 [NCBI]
Genbank nucleotide accession
MH363708.1 [NCBI]
CDS location
range 20731 -> 22983
strand -
CDS
ATGAGCGATATTGTTTTTTCTGCCGTGCGTATGCCGTCCAGCCCGTTTATTCAGGTTGGCAAGTTTGCGCCTATCAGCGGCGGTGATATCTATATTGGCAAGCCCGACACCAACCCGAAGGATCCGGCAAATCAGGTGCAAGTGTACCTGGAAAATGAGGATCTAACGCTGGTGCCGGTGCCGCAGCCGATCAAAATCAACCAGAGCGGCTATCCCGAATATAACGGGATTGTTGGGCGCTTTGTGACGCAGACCGCATCAAGCATGGACGTTTATGATCGCAATGACGTGCTGCAATATTCCTTTGATAACCTTCTGGAATATGACGCGGCGCAGATGTGGAAGGTGATCGGATCGTCTACCGGCTGGGAATACGTGGGCACGCCAGAAGGCACGCTAAAAACCAAACTGCAAGGCTTTGTGACGCCGTTTGATTTTGTGGGCCGCGAAGAGTACACCAGCGTTTCACAGGCGATTCAGGCAATGTTTGACTACGCCAAAGCGAACGGGAAGATCGTCAACGCTTATGGTTGGTCTGGCACGCTTGAAAGCACGGTCAACCCGAATGGGATCACCATCATGGGGGGAACCTGGAAGGGCACCGCAGATTTTCGCCTGACTGACACCCTGATCGAAGGTGCAGTGATTAACAACCTGCGAATCATGCACTACGGCGGCGACGTAAGGATCCGCGATTGCATGTTTGACGGTAAGCCGACAACCAGCAAGGTTGCATCAATCATGATGCAGGGTGTGCCAGTGGACGGAAGCACTATTGAGGTCAGCGATTCCGAGTTTCGGAATGGCCTTTACGGCATCCTCCAGCAAGGCACGGGATCAACGGTTGTGTCCGGCGTCTACCGCAATTTGTCGTTTTACGATATGGGCGGCGACGGGATCGAGTTAAACGTAGTACAGCGCCATTATGATAATGGTTGCCTGATTGACGGCATTTTCCTTGATAACATCGACTCAACAGGCCAAGCCCCGATCACGCCGTCAAACTGGGGTATTGGGATTGGGGTTGCAGGTCAAAGCCCTTATGGCATTGATACACCTGACGCAAACTTTGCCAAAAACATTACGATCCGTAACGTTTACGCAAACAAAGTGCGTCAGATCGTACACTTCGAAATGGTTCGTGATTCCGTTGTTGAAAACATCCACGGCGACCCCAACCAGAACGTTTCGAACGGTTCCGGCCTGACGGTTGCGACGGTGCTTTTCTACGGCTCCCGCCGTTGCTCCATTGATGGGGTTTACGGTGAACCGGTAGTTACCGGCAGCACGCTTGCCCAGGATGTGCGCGTTATTATGCTTGAATGGGGCACAAATGCTGGCGTTGGCGCGCGCGGCCCTTGTCACGATATGGCGATCCGCAACGTATACAGTAAAACAGGGCGCTTTTATGCCGGTATCGGCACCGAGAAGGCAGGGGCAACTAACACGTATTACATTGAAAATGTGAACGTGGCGAAATTCTCGCTTTTCGGTGTGGCAACTGAATTGAACATGAGCAATGTTCATTGCCGGATCTTTGATTGCGTGGGTGATGATTCATCGGGCGGCACAGCTTCAAACGGCTACCTTGCCACGGGGCGCACCATCTTGCGAATGGTCAACGTTAACGCAACTGACGTGAACGGCTACGGCGATCAAGGTTGGTCACGCTGCGCCTATTCGCATATCGAAAGCGTAGGATCCAACGTCTTTGCGCGCCCATATCCGCGCCAGGGGATTGACGGCGGGATCGGTGCAAAAATGACCGCATCGAATCACACTTATATCATTCCGTCACCGGCTGATATGAACGCCACGGGCATTTGGGATGGTAACGCATTCCCCACGGGGCGTGAGTTCATGGAGGGGGATCTCGTTGTTCGAAATGACGGAAAGATCTTCGTTGTGACCGCCTCCGGCGCGTACATTCCCGCCATTGATGAATTTAAAATCAAGGCAACCACCGTGGGATCCTTCTCGATTGCTTCAAACTTTCCGCTAGGTGGCAATAATGGTGATATGGTCTGGATCTACAAAACGCCACTTTCGCCAGGGTGCCGAATTGTGATCCCTGGTGCCGGTGAAGGGGGCAATCCTCTTTCTACGTGGATCACGCGCGGGCCTTATCGTGTCAACGTGAACGATCCAACCAGTGAGATCAGGATCGATATTGCTCACGCTATCCAGACCGCCACACCGGCTGGCACCCAGCTTGCAGCGGCAAAAGTTGTGTCGTTCCGCACGCCAACATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5b61caea1cb7e7e5019e114a8a1c5b3c85f76108e61abf06554dc332525b4727
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6764
Evidence 0,6764
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of C130_2, a novel myovirus infecting pathogenic Escherichia coli and Shigella strains Svab,D., Falgenhauer,L., Rohde,M., Chakraborty,T. and Toth,I. 2018 30238162 GenBank