Protein

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Genbank accession
YP_001974375.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKPILFNKNEQQFDTYGLGEIDVTTGNVTRERNGLYTFYAEYPANGPLASILEKEMKIKADAGLRTKNQTFEISRIVKDSSGVLKIYGSHIKHKLEYMAVRHGINLSGTASVALAIWANNLIGDYRFSTWSDIDTTGSTTFTADKMTNAHLALGGVEGSILDVWGGEYEFDNLTVRLHKQLGRRAPTVLEYGRNIISAESDESIEESYTSVYPFATYTPDSQGSDSTPAPVTVTIPGDYVDSKYISMYANRRIKVVDFSSEFKEKEIPTPDKLRTMALKFMEHNKIGAPKINTKIEYVDLASTLDYQDNKIIEELEFCDIVPVYYPSIGITEDDAKVTKIVYDFVNERNESVEFGIIGESIRSAMTGGLSGRMDSLENRQKAIESGLPDYLLNASGNKVWYQKPAEGTEHKLGDLWFEKNGQYDRMYVWNGEMWEKRIDTEDVDKVKKDIDEKLKQSTESIQQVDNKASEALTKAGAIIDSQELLDKINAHLYSDANNDGNGILGKKFRLQREANRSTRNIATSTRDKLTEYQRTNDENLVRIGQQLDNTVSKAEMKQTADGIRETILELQTNGSGGPNMLRNSRADEGLQYWAEANNRLGFTSHQFYFNGQKKMFELRPGAVVKSPRFIVKRNADYTLNVLGFDNNSKYFRVYFCKRKKGSTADFEEKQLVFDGQPQWTDGPVFNNVKTAKKSFKFNIGEFDDGYLQFEYDRNNPNKWGGLFMTELDFYEGTTDRKWQPAPEDGAEWLNGKITTLDRTVDGIKATVTEAKSYIDADGQRRQELNQLIRDETAKGINTVLSTVEQSGYAKRTEIQSITETQRLYDRIIGTTEDGIKQNIARMTLTDSLFQTEVSKVVNKELTSSNYVANPFTMSDYVRKYFGKGDSSTVSLVSSGLSAFGKLEFHANSRLTSNDAVWLPLNRIPESVKDLSFSIVVEGIDKCNISVAIGTENASSSISYKRQGDTIYGTWTGISYYYKGSDGVYLKISFSGLNGESVFLKKPIVVEGREPKFDFEVNKRMEVDQAVRSVQTQLAGSWAIKNLNSAGDLISGINLGADGRNRITGKLTHITNETLMDRASIKSAAIESITADQITTGTLNASRINVINLNAKSITSGTFRGLEYEGGIIRGNNGNTIINLNTNFTTYNGTARIEFKSPQNCLVHSSGGTHAFLTPTQRQGTTYAAWALGVGGSALDTNANFTGIKIFNDPGAREVILIGDVRFVKDTFTRNAPATALTDILSQIQYNFVQIKNWFQRSDLGYPGLYDIGL
Physico‐chemical
properties
protein length:1269 AA
molecular weight: 141844,09390 Da
isoelectric point:5,73172
aromaticity:0,09614
hydropathy:-0,50662

Domains

Domains [InterPro]
DC_1353
STR
1–719
DC_1353 DC_2025
IPR007119
Unmapped
30–355
IPR007119 Coil IPR012892
YP_001974375.1
1 1269
Architecture
STR
RBD
STR 1-719 | RBD 747-1253 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001974375.1
1 1269
Domain Start End Length (AA) Confidence
N-terminal 1 591 591 0,9271
Central domain 592 1120 530 0,4334
C-terminal 1121 1269 148 0,4253
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-591
Central
592-1120
C-terminal
1121-1269

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage PH15
[NCBI] 		537874 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus gordonii
[NCBI] 		1302 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001974375.1 [NCBI]
Genbank nucleotide accession
NC_010945 [NCBI]
CDS location
range 29982 -> 33791
strand +
CDS
TTGAAGCCTATTTTATTTAATAAGAATGAGCAACAATTCGACACTTACGGGTTGGGAGAAATTGATGTAACAACAGGAAATGTCACCCGTGAGAGAAACGGTCTCTATACGTTTTATGCGGAATATCCAGCTAATGGCCCTCTAGCCTCCATCTTAGAGAAAGAAATGAAAATCAAGGCAGACGCTGGACTGCGAACGAAAAACCAGACCTTTGAAATATCCAGAATTGTCAAAGACAGTAGCGGAGTTTTAAAAATCTACGGTAGCCACATAAAGCATAAGTTAGAGTATATGGCAGTTCGTCACGGAATCAACCTAAGCGGTACAGCTTCCGTGGCTCTTGCTATCTGGGCTAATAACCTGATAGGTGACTATCGTTTTTCCACTTGGTCAGATATTGATACGACAGGTAGCACAACATTTACCGCAGACAAGATGACCAACGCGCATCTTGCTCTTGGTGGTGTTGAGGGCTCTATTTTAGACGTCTGGGGCGGTGAGTACGAGTTCGACAACCTAACAGTTAGGTTGCACAAGCAACTTGGTAGAAGAGCTCCTACGGTCTTAGAATACGGTAGAAACATCATATCAGCCGAGAGTGATGAATCTATCGAAGAATCCTACACCTCAGTCTATCCGTTTGCTACCTACACACCAGACAGCCAAGGGAGCGATAGCACACCAGCACCCGTCACGGTGACAATACCAGGCGATTATGTAGACAGCAAGTACATCAGCATGTACGCTAACAGACGTATAAAAGTGGTAGATTTCTCCAGCGAGTTTAAGGAGAAGGAAATCCCAACCCCTGACAAGCTGAGAACTATGGCATTGAAGTTTATGGAGCACAATAAGATTGGCGCTCCTAAAATCAATACCAAGATTGAGTACGTGGACTTGGCAAGCACCCTTGATTATCAAGATAACAAAATCATTGAGGAGCTGGAGTTCTGCGACATCGTACCCGTCTACTATCCATCTATCGGGATTACAGAGGACGATGCAAAAGTTACTAAAATTGTTTACGATTTTGTCAACGAGCGCAACGAATCTGTAGAGTTTGGTATCATCGGTGAATCTATTCGCTCGGCTATGACTGGTGGATTGTCAGGACGCATGGACTCGCTAGAGAATCGGCAGAAAGCCATTGAAAGCGGGCTACCTGATTATCTCTTGAATGCGTCAGGCAATAAAGTCTGGTATCAGAAACCAGCTGAGGGGACAGAACACAAACTCGGCGACTTATGGTTTGAGAAAAACGGGCAATATGACCGCATGTATGTCTGGAATGGTGAGATGTGGGAAAAGCGCATTGATACCGAAGATGTGGACAAGGTCAAGAAAGATATTGACGAGAAACTGAAGCAATCCACAGAGTCCATCCAGCAAGTCGACAACAAAGCCTCTGAAGCCTTGACAAAGGCAGGCGCAATCATTGATAGCCAAGAGTTGCTGGATAAGATTAATGCCCATCTATATTCAGACGCTAATAATGACGGCAACGGAATCTTGGGCAAAAAGTTTCGACTGCAACGAGAAGCTAACCGTTCAACTCGGAACATAGCCACATCAACTAGAGATAAGCTAACCGAATATCAACGCACAAACGATGAGAACCTAGTTCGCATTGGTCAGCAACTGGACAACACGGTCAGTAAGGCCGAGATGAAGCAGACTGCAGATGGGATTAGAGAGACGATTTTAGAGCTTCAGACCAATGGTTCAGGCGGGCCGAATATGCTCAGAAACTCTCGCGCAGACGAGGGCTTGCAGTATTGGGCAGAAGCTAATAATAGACTAGGCTTTACCTCTCACCAGTTCTACTTCAACGGTCAAAAGAAGATGTTTGAGTTGAGGCCTGGAGCAGTCGTTAAAAGTCCACGTTTCATCGTTAAACGCAATGCTGATTACACGCTGAATGTCCTTGGATTTGATAATAACTCTAAGTATTTTAGAGTTTATTTCTGCAAGCGCAAAAAGGGATCAACAGCGGACTTTGAAGAAAAGCAACTGGTCTTTGACGGCCAACCGCAATGGACAGACGGCCCTGTATTTAACAACGTCAAAACTGCTAAGAAGTCGTTTAAATTTAACATCGGGGAATTTGATGACGGCTATCTTCAATTTGAGTATGACCGAAATAACCCCAATAAATGGGGCGGTCTATTTATGACCGAGTTGGATTTCTACGAAGGCACAACCGATCGTAAATGGCAACCGGCACCCGAAGATGGCGCAGAGTGGCTAAATGGTAAGATAACCACATTAGACCGTACGGTGGACGGCATTAAAGCGACTGTCACAGAGGCCAAGAGCTACATCGACGCAGACGGACAGAGAAGACAAGAGCTGAACCAGCTAATCAGAGACGAGACGGCCAAGGGCATCAATACAGTCTTGTCTACAGTCGAGCAGTCAGGCTATGCCAAGCGTACAGAGATACAGTCTATCACAGAGACGCAAAGGCTCTATGACCGTATCATTGGCACGACGGAAGATGGAATCAAGCAGAACATCGCTCGGATGACATTGACGGATAGCCTGTTTCAGACGGAAGTCTCGAAGGTGGTTAATAAAGAGCTTACGTCTTCAAATTATGTAGCCAATCCGTTTACCATGTCAGATTATGTAAGGAAATATTTTGGCAAAGGGGATTCTTCAACGGTTTCTCTCGTAAGTTCGGGCCTCTCCGCTTTTGGCAAATTGGAGTTTCACGCCAATTCAAGGTTGACGTCTAATGATGCCGTGTGGTTGCCGTTAAATCGAATCCCAGAAAGTGTCAAGGATTTATCCTTTTCAATCGTTGTTGAAGGAATTGATAAATGTAATATTTCCGTAGCCATTGGCACCGAAAATGCATCATCATCTATATCCTACAAACGGCAAGGCGATACGATTTACGGAACATGGACGGGCATTAGCTATTATTATAAAGGTTCTGACGGTGTTTATCTTAAAATCTCATTCTCTGGTTTAAATGGGGAAAGCGTGTTCCTCAAAAAACCTATTGTCGTAGAAGGTAGAGAGCCTAAATTCGATTTTGAGGTAAACAAGCGGATGGAAGTAGACCAAGCTGTCCGAAGCGTCCAAACTCAATTGGCGGGCTCTTGGGCTATCAAAAATCTAAATTCAGCTGGCGATCTAATCTCTGGTATCAATTTAGGCGCAGATGGTAGGAATCGCATTACTGGTAAGTTAACACACATTACTAATGAGACGCTGATGGACAGAGCTAGTATAAAGAGTGCCGCGATCGAGAGCATAACAGCTGACCAAATAACCACTGGGACACTTAATGCATCGCGAATCAATGTAATCAACCTCAACGCAAAAAGTATAACATCTGGAACGTTCAGAGGGCTTGAGTATGAAGGTGGTATTATCCGAGGGAACAACGGGAATACTATCATCAATCTTAATACTAATTTCACGACGTACAATGGTACGGCTAGGATTGAGTTCAAATCACCTCAGAATTGTTTAGTCCACAGTTCTGGTGGTACACACGCTTTCTTAACTCCAACTCAAAGGCAAGGCACAACTTATGCAGCGTGGGCCTTAGGTGTTGGTGGTAGCGCGCTTGATACCAATGCTAATTTTACGGGCATTAAGATATTTAATGACCCTGGAGCGCGAGAGGTTATTTTGATTGGAGATGTGCGATTTGTAAAAGATACGTTTACCCGAAATGCTCCAGCTACAGCGTTAACCGATATATTATCTCAAATACAATATAACTTCGTTCAAATCAAAAATTGGTTTCAAAGAAGTGATCTAGGTTACCCTGGTCTATATGACATCGGCTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
33425ab6d75779337e166cd79fabd71ac6ba063c5d5cef0c53789b3f31491f73
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50