Protein

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Genbank accession
YP_010670597.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MSGNLRLYGATSGYSQISAPDVAGDQIFVVPSLGGEVIVSGNNQSLDLGTGDLSAADGTFGSGNITLNENGSGVFKGNVIVDKPAVNKAFITQLSGVEKASISSDGSATFGSGNITLGADGSGTFSASLQIGPNAQAGDNPFLTVGSGNRRGTVIIKGPSPDANASAILVEVPGSSTALQVTHDGTTKIGGTSSDPNITLNANGNVTFAGTLITPGLSATASAGGALKIIGNEIYRDSSARATKENIVSLEESESVAVTKGLRPVNYLPKGDPDGHLQIGFIAEEVLEVCPPAAITENGEAIGVAYDRLTAICISALQQALTRIEALEAEVQALKDN
Physico‐chemical
properties
protein length:337 AA
molecular weight: 33962,27900 Da
isoelectric point:4,47177
aromaticity:0,04154
hydropathy:0,01929

Domains

Domains [InterPro]
DC_1330
STR
2–337
DC_1330
IPR030392
CHP
239–292
IPR030392 Coil
IPR030392
CHP
239–331
IPR030392
YP_010670597.1
1 337
Architecture
STR
STR 2-337
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010670597.1
1 337
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,1904
Central domain 34 232 200 0,2723
C-terminal 233 337 104 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-232
C-terminal
233-337

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670597.1 [NCBI]
Genbank nucleotide accession
NC_070965.1 [NCBI]
CDS location
range 63987 -> 65000
strand -
CDS
ATGAGCGGAAACCTACGACTTTACGGTGCCACTAGTGGGTACAGTCAAATCTCTGCACCTGATGTCGCAGGTGACCAAATCTTTGTGGTACCCAGTCTGGGTGGTGAAGTTATCGTTAGTGGCAACAACCAGTCATTGGACCTCGGTACAGGTGACCTGAGCGCTGCTGATGGAACGTTTGGTAGCGGGAACATCACGCTGAATGAGAATGGCAGCGGCGTGTTTAAGGGCAACGTAATCGTAGACAAACCTGCAGTTAACAAAGCTTTCATTACGCAGCTGTCTGGCGTAGAAAAGGCTTCCATTAGTTCCGACGGTAGCGCCACGTTTGGCAGCGGGAACATCACGCTGGGTGCGGATGGCTCTGGAACGTTTAGTGCAAGCCTACAAATTGGACCAAACGCACAAGCTGGCGACAATCCATTCCTAACTGTGGGAAGCGGTAATCGTCGCGGTACCGTGATTATTAAAGGTCCTAGCCCTGATGCAAATGCTTCAGCGATTTTAGTGGAGGTCCCAGGCAGTTCAACTGCGCTTCAAGTTACCCACGACGGTACAACCAAAATTGGGGGGACTTCCTCCGACCCGAACATCACGCTGAATGCGAATGGTAATGTCACTTTTGCGGGCACACTCATAACTCCTGGACTTTCTGCTACCGCTTCTGCTGGTGGTGCGCTGAAAATCATTGGGAATGAGATATACCGCGATTCGTCAGCTAGGGCTACTAAAGAGAACATTGTTTCTTTGGAAGAGTCCGAGTCGGTAGCGGTAACTAAGGGGCTTCGTCCAGTCAACTACCTGCCCAAAGGCGACCCCGACGGGCATCTTCAAATTGGCTTTATCGCAGAAGAGGTCTTGGAAGTGTGCCCGCCTGCCGCTATTACCGAGAATGGCGAAGCAATAGGCGTCGCTTACGACAGGCTGACAGCAATTTGCATTTCAGCTTTGCAGCAAGCACTCACCCGCATCGAAGCCCTTGAGGCTGAAGTCCAAGCCCTTAAAGACAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ccace396cfbe952a38d63827c06752fc1036c98d2aca2b8c39cbf50a72969847
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7095
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank