Protein

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Genbank accession

CAB4149416.1 [GenBank]

Protein name

Collagen triple helix repeat

RBP type

TSP

Evidence DepoScope

Probability 1,00

Evidence RBPdetect

Probability 0,88

Evidence RBPdetect2

Probability 0,91

Protein sequence

MTLGYVKVTSESPLLNGEVEVISPSKIKVLASGLTFGQGPVGPQGPEGPQGEQGEQGVPGPTGNTGAQGNQGIQGIQGIQGIQGIQGIQGNTGNTGSTGSQGIQGIQGEKGDKGDTGNNGADGDRYHTTSTTSLTIASSGEITLTTVDLHLDYSFAQTVIIAHDDANHMHGEVVSYNGTTGSLVVELKNKTGSGTYTSWTINLDGAVGIQGPQGEQGEPGPQGDQGIQGIQGEQGVKGDTGDQGIQGIQGIQGDQGIQGIQGETGNTGAAGADASVIVNGSNIKFTGVGALDSITSGANNTALGFNTIDKVTSGSNNTALGTSALESATGNGNTALGRSALVGLTSGNNNTAVGNFANSFPGTTSDQVFVGVGSGQLSGTGVTAVGTITGGSGYTDGTYTDIALIPENFDYWASAVFATLVVSGGSVTGVTITNPGAGISVGQILIIDYSFEPPVELNGSGFSVPVTGINTVQRNTGIGRGALQLNQNGSGNTAIGYRAGWQSQGSNNVLLGNQAGLTENQSNRLAIGNGTGDLITGNFAGSGNALVTINGALEVGETYINRTINQLVIKKNSSASVNAIQVDFDPTGAQSNTVKVNGTFVLTASGPSTSTDGGNTGQLGFDTNYLYVCVVGGAPGSATWKRVALTSF

Physico‐chemical properties

protein length:	648 AA
molecular weight:	64722,71860 Da
isoelectric point:	4,36571
aromaticity:	0,05093
hydropathy:	-0,18889

Domains

Domains [InterPro]

DC_1391
STR
5–96

DC_1391 IPR008160 DC_0520

IPR050149
Unmapped
38–273

IPR050149

IPR008160
STR
39–93

IPR008160 G3DSA:1.20.5.320 DC_1037

DC_1245
STR
70–249

DC_1245

CAB4149416.1

1 648

Architecture

STR

RBD

STR 5-326 | RBD 413-648

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1391	STR	DC_1391	5	96	Novel HMM	DC_1391	Central	Low	Positional only	28 proteins / 28 hits
IPR050149	Unmapped	-	38	273	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	39	93	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1245	STR	DC_1245	70	249	Novel HMM	DC_1245	Central	Low	Positional only	25 proteins / 25 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	93	147	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
IPR008160	STR	DC_0536	211	269	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1037	STR	DC_1037	233	326	Novel HMM	DC_1037	Central	Low	Positional only	43 proteins / 43 hits
DC_0520	RBD	DC_0520	413	648	Novel HMM	DC_0520	C-terminal	Low	Positional only	30 proteins / 30 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

CAB4149416.1

1 648

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	281	281	0,8867
Central domain	282	533	253	0,8465
C-terminal	534	648	114	0,9401

Note: Constraints were applied during segmentation.
Fixed 27 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-281

Central
282-533

C-terminal
534-648

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	uncultured Caudovirales phage [NCBI]	2100421	Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

CAB4149416.1 [NCBI]

Genbank nucleotide accession

LR796517 [NCBI]

CDS location

range 12902 -> 14848
strand -

CDS

ATGACTCTTGGCTATGTAAAAGTAACATCTGAATCACCATTACTTAATGGAGAAGTTGAGGTTATTTCTCCAAGCAAGATTAAAGTTCTTGCATCAGGTTTAACATTTGGTCAAGGTCCTGTAGGTCCTCAAGGCCCAGAAGGTCCACAAGGAGAACAAGGCGAACAAGGAGTTCCTGGACCAACTGGAAATACTGGTGCACAAGGAAATCAAGGCATTCAAGGTATCCAGGGCATCCAAGGTATTCAAGGAATTCAAGGGATCCAAGGAAATACTGGAAATACTGGCTCAACTGGTTCTCAGGGTATTCAAGGTATTCAAGGAGAAAAGGGCGACAAAGGTGATACAGGAAACAATGGTGCTGATGGAGATAGATACCACACTACATCTACAACATCATTAACAATTGCTTCTTCTGGAGAAATAACATTAACAACTGTTGATTTACATTTAGATTATTCTTTTGCACAGACAGTTATTATTGCACATGATGATGCAAACCATATGCATGGTGAAGTTGTTTCTTATAATGGAACAACAGGTTCATTGGTTGTTGAATTAAAGAACAAAACAGGTTCTGGAACATATACATCATGGACAATTAACTTAGATGGTGCTGTTGGTATTCAAGGACCTCAAGGAGAGCAAGGAGAGCCTGGACCACAAGGTGACCAAGGCATTCAGGGTATTCAAGGAGAGCAAGGCGTTAAAGGAGATACTGGAGACCAAGGTATTCAAGGAATACAAGGAATTCAGGGTGACCAAGGAATCCAGGGTATTCAAGGAGAAACTGGTAACACAGGAGCAGCAGGAGCAGATGCATCAGTAATTGTTAACGGTTCTAATATTAAATTTACTGGTGTAGGCGCACTTGATTCAATTACTTCAGGTGCTAACAATACAGCACTTGGTTTTAATACTATTGATAAAGTTACATCTGGTAGTAATAATACAGCACTTGGAACTAGCGCATTAGAATCTGCTACTGGAAATGGAAACACTGCTCTTGGAAGAAGTGCTCTTGTTGGCCTTACAAGTGGTAATAATAATACTGCTGTAGGTAATTTTGCTAATAGTTTTCCAGGAACAACAAGTGACCAAGTATTTGTAGGTGTAGGATCAGGTCAGTTAAGCGGTACTGGAGTAACAGCAGTTGGAACAATTACTGGTGGTTCAGGATACACTGATGGAACATATACTGATATTGCTTTAATACCAGAAAACTTTGACTATTGGGCCAGTGCTGTATTTGCAACCTTAGTTGTTTCTGGTGGTTCAGTTACAGGTGTAACCATTACAAATCCTGGTGCAGGAATTAGCGTTGGTCAAATATTAATAATTGATTACAGTTTTGAGCCACCAGTCGAATTAAATGGTTCTGGATTTAGTGTTCCTGTTACTGGAATAAATACAGTTCAAAGAAATACTGGAATTGGTAGAGGAGCATTGCAATTAAACCAAAACGGTTCAGGTAACACTGCAATTGGTTATAGAGCAGGATGGCAATCACAAGGTTCTAACAATGTTCTTCTTGGCAATCAGGCTGGACTCACAGAAAATCAAAGTAACAGATTAGCAATTGGTAATGGTACTGGAGATTTAATAACAGGTAACTTTGCAGGTTCAGGAAATGCTCTTGTTACAATTAATGGGGCACTTGAAGTTGGAGAAACCTATATTAATAGAACCATTAATCAACTTGTTATTAAAAAGAATTCAAGTGCTTCAGTAAATGCAATTCAGGTTGATTTTGACCCAACAGGTGCTCAAAGCAATACTGTTAAAGTCAATGGAACATTTGTATTAACTGCTTCTGGACCTTCAACATCTACAGATGGAGGAAATACAGGACAACTTGGGTTTGACACAAATTATTTATATGTATGTGTTGTTGGCGGAGCACCAGGTAGTGCGACCTGGAAGAGAGTGGCTCTTACATCCTTCTAA

Genome Context

Tertiary structure

PDB ID

77a9971168a5a97291574d0e93972e6194df13bc94f4a941dbb7f97cefa72467

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7143

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence