Protein

View in Explore
Genbank accession
QHS01818.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTNTIRHVSDESVYKIFKPAGTAFPSNITNVQAALAALNPIAINGIPNATQTVIGISRFASQAEVDSGTLNNVSVSPATLKSAILRPPATTTVAGLTRYATTSEALAGTVGNAAVVPTGLKASVDAAKTQILSTQATELVMGLAKISTQAAALAGADDLTIMTPKKVALAIGKAIATVPSYSNASESNYGLVRMATAGEVQAGNVGNAVAISPANLKTLTSTTSRNGLISIASGAEVAAGTNNTKAITPAALLSRTGNESRTGLLKTTRTVGSGDGSTALAYNANVISTQGNQSINGGLTLTGLQINGQANITSNATIGGNLTVSGGITSRGQQVVTIDMIGDDVPVGVIVMWIGAANKVPAKWRICDGGYTYSASSNPALWNVLPTGRVPDMRGLFVRGAGVGADILNAQSPDSKGKPGLGVGCGAGAVGTVQAQAVKKHKHNSGWGEHHNRSDAYFGATNRNGFRGNNRRDSDNYLYFTNDGAEYEAEGSRDSFGTMNPKDLMQDENRPWNIAVYYIIKIQ
Physico‐chemical
properties
protein length:524 AA
molecular weight: 53897,90090 Da
isoelectric point:9,37746
aromaticity:0,04962
hydropathy:-0,08989

Domains

Domains [InterPro]
DC_0176
STR
1–477
DC_0176
SSF69349
STR
249–356
SSF69349 IPR044916
IPR015173
STR
251–321
IPR015173 SSF88874
IPR037053
ATT
345–398
IPR037053 IPR027448
IPR011083
ATT
349–399
IPR011083
QHS01818.1
1 524
Architecture
STR
ATT
STR
STR 1-344 | ATT 345-399 | STR 400-523 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_EclM_CIP9
[NCBI] 		2696340 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kanagawavirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHS01818.1 [NCBI]
Genbank nucleotide accession
MN882610.1 [NCBI]
CDS location
range 158229 -> 159803
strand +
CDS
ATGACTACTAATACAATACGTCACGTCAGCGACGAATCGGTATACAAAATTTTTAAACCCGCAGGAACCGCATTTCCTTCTAATATCACAAACGTTCAGGCTGCTTTGGCGGCCTTGAACCCTATTGCGATTAATGGTATCCCTAATGCAACACAAACCGTTATAGGGATAAGTCGATTTGCGTCTCAGGCGGAGGTAGATAGCGGTACCCTTAACAACGTTAGTGTTTCTCCAGCAACATTAAAGTCCGCCATCCTGCGTCCACCTGCAACGACTACAGTAGCAGGTCTTACTAGATATGCTACTACTTCAGAAGCTTTAGCTGGAACTGTAGGTAATGCAGCAGTGGTTCCTACAGGTCTTAAAGCTTCTGTTGATGCAGCAAAAACACAAATTCTTTCCACTCAAGCCACTGAATTGGTTATGGGTCTAGCTAAAATATCTACACAAGCTGCTGCTTTAGCAGGTGCAGATGATTTAACTATAATGACTCCTAAAAAAGTAGCGTTAGCTATTGGTAAAGCTATTGCGACTGTTCCATCATATTCTAACGCGTCCGAATCAAATTATGGTTTAGTTAGAATGGCTACTGCCGGTGAAGTTCAGGCAGGTAACGTCGGCAATGCGGTTGCAATTTCCCCAGCAAATTTAAAAACTTTAACTTCTACCACTTCAAGAAATGGTTTAATTTCTATTGCTTCTGGTGCTGAAGTCGCTGCTGGTACTAATAATACCAAAGCTATTACTCCGGCTGCATTATTATCTAGAACAGGTAATGAAAGTAGAACAGGCCTTCTTAAAACAACTCGAACCGTTGGTTCAGGTGATGGAAGTACTGCATTAGCTTATAATGCCAATGTTATTTCAACCCAAGGCAACCAATCTATTAATGGTGGATTGACTCTTACAGGTCTTCAGATTAATGGACAGGCTAATATAACATCAAATGCGACAATTGGTGGTAATTTAACCGTATCAGGCGGGATTACTTCTAGAGGACAACAAGTTGTTACTATTGATATGATAGGCGACGACGTCCCTGTAGGTGTTATTGTTATGTGGATCGGTGCTGCAAATAAGGTCCCAGCAAAATGGCGTATTTGTGATGGTGGATATACTTATTCAGCGTCTTCAAACCCGGCGCTTTGGAATGTTTTACCTACCGGCCGTGTTCCTGATATGAGAGGTTTATTTGTTCGTGGTGCTGGTGTTGGTGCTGATATTCTTAACGCTCAATCACCTGATAGTAAAGGTAAGCCAGGTCTTGGCGTAGGTTGTGGTGCTGGTGCTGTCGGTACAGTTCAGGCTCAGGCTGTTAAGAAACATAAACACAACAGTGGTTGGGGTGAACACCATAACCGTTCTGATGCATATTTCGGCGCTACTAACCGTAATGGCTTCCGCGGTAATAATAGACGTGATAGTGATAACTATCTGTATTTTACTAATGATGGTGCCGAATATGAGGCCGAAGGTTCCAGAGATTCATTTGGAACAATGAACCCTAAAGACCTGATGCAAGACGAAAACCGTCCTTGGAACATCGCAGTATACTATATCATCAAAATCCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b12d54cf2b09b3f3b9b80a112636072be7fde940bf6972529f0198253e93969e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6698
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the Enterobacter Phage vB_EclM_CIP9 Wang,K., Tamayo,M.G., Penner,T.V., Cook,B.W.M., Court,D.A. and Theriault,S.S. 2020 — GenBank