Protein

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Genbank accession
WCD43964.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALVDQKTPRLGLLLPYTDNFLQDDVERLRDTLNLLDVLVVTRDQTTGKIADDMLSDVIAKLDANGKLNKANLPSTVVQTGPDGKIDGSLMPSIAVIDTFPVPNEASMLGLQCERGDIAIREDLGKTFILTQMPPSVLSNWRELTSTNVTSVNGKTGAITGLAASGANNDITSLNALSGPLRLGGDAAGDYDAVTLKQLRAASGGAGGASMNGVMNNFIGAVEWFNGSRAKLPAGYIAADGQLASRTDPSTADLWAAVNAGILVSAASDAAWQNSGVPGAEWNNRGMYSPGDGSTTFRIPDLNSQWNDPAQRWTPQGLFLRSSGRLFGNGVGNIIENAAPNITGGVSTAGAGAFNPGNGVGTALFSGAAAPYGAITPSSATAASNTLTLDASKSNAAYGRFATNEIRPNAALGIWIIRASGSFIAAGTSFSVINADAAEPQTGFIAHGGTVESNYTVAGVTRAATSVITTYRWGDENPQMNFNTALYDAQGNYVRGNGMSFSGGMLRINNRPAGTGTDASPSSVAFNAGNFWNAAGYSAYAPIVGGGGGTAGGGYRGFISFGALCPKNGDATHPVAVIANTWDWNLNTGASSVPSRSALFVSESFDIQYMRNDGTETYTFTKNATSDERAKHDINDYAPEESLAKIEDLVFKSFIYNNDEQHRLRRGVIAQQAETVDPLYVKTRHYPNANGAPFEMKELDSNALLLDALAAIQVLSRRLEALEGKK
Physico‐chemical
properties
protein length:726 AA
molecular weight: 76121,72520 Da
isoelectric point:5,01356
aromaticity:0,07851
hydropathy:-0,18609

Domains

Domains [InterPro]
DC_1954
STR
16–726
DC_1954
IPR030392
CHP
626–679
IPR030392 Coil
IPR030392
CHP
626–726
IPR030392
WCD43964.1
1 726
Architecture
STR
STR 16-726
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECML-606-1
[NCBI] 		2910940 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD43964.1 [NCBI]
Genbank nucleotide accession
OL631484.1 [NCBI]
CDS location
range 7571 -> 9751
strand -
CDS
ATGGCTTTAGTAGACCAGAAAACGCCCCGTCTGGGGCTTTTACTGCCGTACACTGACAACTTCCTTCAAGATGACGTGGAGCGCCTGCGCGACACGTTAAACCTGCTGGATGTGCTGGTCGTTACGCGCGACCAGACAACCGGGAAGATTGCCGATGATATGCTGTCCGATGTCATCGCCAAGCTGGACGCAAACGGCAAGCTGAATAAAGCTAACCTGCCGTCTACGGTAGTGCAAACTGGCCCGGATGGGAAAATTGACGGCTCACTGATGCCGTCTATCGCTGTGATCGATACCTTCCCGGTGCCTAACGAGGCTTCAATGCTGGGCCTGCAATGTGAGCGCGGCGATATCGCTATCCGTGAGGATCTGGGTAAAACCTTCATCCTCACCCAGATGCCGCCGAGCGTACTGAGCAACTGGCGTGAGCTGACCAGCACCAACGTGACCAGCGTCAACGGGAAGACCGGGGCGATCACCGGGCTGGCTGCATCTGGTGCGAACAATGACATTACCTCATTAAACGCGCTCAGCGGGCCTCTGCGCTTAGGCGGCGATGCCGCTGGTGATTATGACGCCGTAACCCTGAAACAGCTACGTGCGGCTTCTGGCGGCGCTGGCGGGGCATCCATGAATGGCGTGATGAATAACTTCATCGGTGCGGTCGAATGGTTTAATGGCTCGCGTGCGAAACTCCCGGCAGGCTATATTGCTGCCGATGGTCAGCTGGCCAGTCGTACCGACCCAAGTACGGCGGATCTGTGGGCGGCGGTAAACGCTGGGATCCTTGTCTCCGCTGCAAGTGATGCGGCTTGGCAAAACAGCGGTGTTCCCGGAGCGGAGTGGAACAACCGAGGAATGTATTCTCCGGGTGATGGCTCGACCACTTTCCGCATCCCAGATTTAAACAGTCAGTGGAATGACCCCGCTCAGCGCTGGACGCCACAAGGTCTGTTTTTGCGGAGTTCAGGGCGCTTGTTCGGGAATGGTGTTGGTAACATTATTGAAAACGCCGCCCCCAACATCACTGGCGGGGTATCGACAGCGGGCGCGGGTGCTTTCAACCCCGGCAACGGCGTGGGTACAGCGCTCTTTTCTGGTGCGGCAGCCCCCTATGGTGCTATTACCCCATCTTCTGCAACCGCTGCGTCTAACACGCTGACACTCGACGCATCAAAAAGTAACGCTGCATATGGGAGATTTGCAACAAACGAAATTCGTCCCAACGCGGCGTTGGGCATCTGGATTATCCGCGCCTCCGGTTCTTTTATCGCTGCGGGGACGTCCTTTTCGGTCATCAATGCCGATGCGGCAGAGCCGCAAACTGGATTTATCGCTCATGGTGGTACGGTAGAGTCTAACTACACCGTAGCTGGCGTTACGCGTGCGGCTACGAGCGTTATTACCACTTATCGCTGGGGCGACGAGAATCCACAAATGAATTTCAATACTGCGCTGTATGATGCGCAGGGAAATTACGTCCGTGGGAATGGCATGTCGTTTAGCGGCGGGATGCTGAGAATCAATAACCGACCAGCTGGCACCGGGACTGACGCCTCCCCGTCATCGGTTGCCTTCAATGCCGGTAATTTTTGGAATGCCGCAGGGTATTCAGCCTATGCCCCGATTGTCGGCGGTGGCGGAGGTACCGCTGGGGGTGGCTATCGTGGATTTATTTCTTTTGGTGCCCTTTGCCCCAAAAACGGGGACGCCACACACCCGGTTGCAGTCATTGCGAATACCTGGGATTGGAATCTAAATACGGGGGCTTCTTCAGTCCCTTCACGATCCGCGCTGTTCGTTTCTGAATCCTTCGATATTCAGTACATGCGTAATGATGGCACTGAAACGTATACCTTCACGAAAAATGCGACGTCGGATGAACGGGCAAAGCACGATATTAATGATTATGCACCCGAAGAATCATTGGCGAAAATTGAAGATCTGGTATTCAAGAGCTTCATTTATAACAATGATGAGCAGCATCGGTTGCGTCGTGGCGTCATTGCACAGCAAGCGGAAACTGTCGATCCGTTGTATGTGAAAACTCGCCATTACCCCAACGCCAATGGTGCCCCGTTCGAAATGAAAGAGCTGGATAGTAACGCCCTGCTGCTGGACGCATTGGCTGCGATTCAGGTGCTGTCCCGCCGTCTCGAGGCGCTCGAAGGCAAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c35247de83aee314135f0a275d367fdf9ee5d634b914b95ea1a32705ecb3efc6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6252
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Virulent bacteriophages provide an effective reduction of big-seven Shiga-toxin producing Escherichia coli on various foods Vikram,A., Woolston,J., Hickey,S. and Sulakvelidze,A. 2023-09 — GenBank