Protein

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Genbank accession
YP_007676328.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MATTEVFYNGDGSDLTFTIPFEYLEESDVKVSVGGTLKTQDTDYTFSTLTEITFTTAPPSGTNNVRIFRDTDIDSGVRNEFFAGSAIRAQDLNDDFLQVLYSAQEIEDQYVTKTDGEFDTNVDMNDNRVTEMADPVNAKDAVNKQYFEANSWDSDTETILSNETWNSVDNQIATTASIENRVTAKIDDAITNDIGTDGTGITVSDDGDGTITLGLAENTIDFDRIKNTDIITQAEQDAGTPAAADSNIFTALGAARRFDTLVQTGTPSGSDWETGKTWYQNDADKAVYIWDGNSWETVTSGGAFTRLDQVIYVDATNGDDANNGHRISTPKKTIRAALADINSDATYGNGSTILVAPGIYKETAPLDIQKTDVSIVGASVRNVIVHPTEATETNSLFRVNSGSYLANMTFTGVKASGTRGASGSLWTDSEYGLPPTQGWNVSFYPDAKIFKSPYIQNCTNFSDSEIDNDALDFYTGDSDRGQAGDLDSEPTGGGLLVDGSTVHDDSPLRSMVADSYTHVALNGPGIFVTNNGYAQITSSYSFFNHFHIGCLNGGQANLAASTSDFGRFSLVASGRSTSAIFSATTTVEAASGATTFTIGAPTAGSDWFGNATRPADNMLVQVSNNFYPIQSAVPNGSGWDVTIIRPDTTDRTQNLGLNGIVALGSSAFFYLRSMIASSGHTMEYVGAGTDYRALPYNATGTYTVGSGTQPNGVPIEAHQVKELDNGKVWAAITDHNGKFRVGDTFSVNQQTGFVSIPAGALSVSTLLEDLDVNGKEIKTDTTNQDIVLNPNGTGVVNVSTSKITNVVDPTDAQDAATKNFVDNLTTSSTTELNILDGATLNTSELNILDGATLDTNELNQLDGASLTDNPTWTSTTQFPSAASINTRFLGLLNALGGFVAIADENSFPNGNPDPSDGAGTVVSIADAGGMSVNASGEGTGQTTGGDTVTITGFPASFNSSTLPAQQGLQVQTTTTLNTYTYHKVIARDDDIVRLNDDVNDFFQRYRFGASNPTTDNDAGDLFFNTGSGTMLVWDTSGATNEWKEVQSIGEFFVIPTSEFPTWNGTINDITITNAPTNASQIILSINGVVQEPNTGTARPTDGFALDGSVIRLSDAPATGSEAWGVIIGSTVNIGEPSANTVSTDKIVDGAVTTAKLGSGAVTADKLADTAVTAGSYTLSSITVDAQGRITAASSGTAADPDIITEGNTSVEVVDTGSNGEVRLTTEGTRAMTIDSSQRAGLGTSSPTAPMHVKKADTSTSGLVDGIRLQQGSATNSNRLSLTFGSLDNFTVAGVNGVIETHSGTESNNVGRLEFYTKANGSSITERMRIDSSGNVGIGTTSPDHGKLTLFDSASAAFNALVIQQGNTGSTVSDGLHVGIDSNVDAYITHKENRALAFGTANTERLRILAGGGLTFNGDTATANALDDYEEGTWTPELADAVSGGNTVTHAVQDGKYTKVGNIVTCYFRITWSSKGSCADSSLLRVRNFPFTSLSNSGQFYYTGAITPLDGPTTLAMAGNGTDSILYDDNNPNTLQRFSNIPSSNTGGGINGCITYQAN
Physico‐chemical
properties
protein length:1558 AA
molecular weight: 163995,46440 Da
isoelectric point:4,23907
aromaticity:0,07702
hydropathy:-0,28639

Domains

Domains [InterPro]
IPR005604
ATT
4–110
IPR005604 IPR011050 DC_0467
DC_0763
STR
88–888
DC_0763
YP_007676328.1
1 1558
Architecture
ATT
STR
STR
ATT 4-110 | STR 111-888 | STR 1077-1558
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007676328.1
1 1558
Domain Start End Length (AA) Confidence
N-terminal 1 366 366 0,9014
Central domain 367 599 234 0,9743
C-terminal 600 1558 958 0,4196
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-366
Central
367-599
C-terminal
600-1558

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage KBS-P-1A
[NCBI] 		889951 Uroviricota > Caudoviricetes > Autographivirales > Sednavirus SRIP2 >
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007676328.1 [NCBI]
Genbank nucleotide accession
NC_020865 [NCBI]
CDS location
range 10278 -> 14954
strand +
CDS
ATGGCTACAACTGAAGTATTTTACAACGGTGACGGTTCCGACCTCACCTTTACAATCCCATTTGAATATCTAGAGGAATCCGACGTCAAAGTTTCTGTCGGAGGTACCTTAAAAACTCAAGACACTGATTACACGTTTTCAACTCTAACTGAAATTACGTTTACTACTGCTCCCCCGAGTGGTACTAATAACGTACGGATTTTTAGGGATACGGATATTGACAGTGGAGTCCGCAACGAATTTTTTGCGGGCTCTGCCATCCGTGCTCAGGATCTTAATGACGACTTCCTGCAGGTCTTGTACTCTGCACAGGAAATTGAAGACCAGTATGTAACTAAAACCGACGGTGAATTTGATACCAACGTCGATATGAATGACAACCGGGTCACCGAAATGGCTGACCCTGTTAACGCTAAAGATGCTGTTAACAAGCAGTATTTTGAAGCTAACAGCTGGGATTCAGATACTGAAACTATTCTTAGCAACGAAACTTGGAACAGCGTTGACAATCAAATTGCAACCACGGCTTCTATTGAGAACCGTGTTACTGCAAAGATTGACGACGCTATCACCAACGATATTGGTACCGATGGTACTGGTATCACTGTAAGTGATGATGGTGACGGTACTATCACTCTTGGTCTTGCGGAAAACACGATCGATTTTGATCGGATTAAAAACACCGACATTATCACTCAAGCTGAGCAAGATGCAGGTACTCCTGCTGCAGCTGATTCTAACATCTTTACTGCACTAGGTGCTGCACGTCGTTTTGATACTCTTGTACAAACTGGTACGCCTAGCGGATCTGATTGGGAAACTGGTAAGACTTGGTATCAAAATGATGCAGACAAAGCTGTTTACATCTGGGACGGCAACAGCTGGGAAACTGTCACTTCTGGTGGTGCCTTCACTCGTCTTGATCAAGTCATTTATGTTGACGCTACTAACGGTGATGACGCCAATAATGGTCACCGTATCAGTACTCCTAAGAAGACCATTAGGGCTGCTCTTGCTGATATTAACTCCGACGCTACTTACGGAAACGGTAGCACCATTTTAGTTGCTCCTGGTATCTACAAAGAAACCGCACCTTTGGACATTCAAAAAACTGATGTCTCTATTGTCGGTGCGTCTGTTCGTAACGTTATTGTACACCCGACTGAGGCAACTGAAACCAACAGCTTGTTCCGTGTAAACAGCGGTTCGTACCTTGCTAACATGACGTTTACTGGCGTCAAGGCTAGCGGTACCCGTGGTGCTAGCGGTTCTCTGTGGACTGATTCTGAATACGGTCTACCGCCTACTCAAGGTTGGAACGTTTCGTTCTATCCTGATGCTAAGATTTTCAAATCTCCTTATATTCAGAATTGTACTAACTTCTCGGATAGTGAGATTGACAACGATGCTCTGGACTTCTACACGGGTGATTCCGATAGAGGTCAAGCAGGTGACCTTGACTCCGAACCTACTGGTGGTGGTCTGCTAGTTGACGGTAGTACTGTTCACGACGACTCTCCACTTCGTTCGATGGTGGCTGATAGCTACACTCACGTGGCTTTGAATGGTCCTGGTATTTTTGTTACCAATAATGGTTACGCTCAAATTACTAGCTCCTACTCATTCTTTAACCACTTCCACATTGGTTGTTTGAATGGTGGTCAAGCTAACCTTGCAGCTTCCACTTCTGACTTTGGTCGGTTCTCGTTGGTTGCAAGTGGCCGTTCGACCTCTGCCATTTTTAGTGCAACTACAACCGTAGAAGCTGCCTCTGGTGCTACCACGTTTACTATTGGAGCTCCTACGGCTGGTAGCGACTGGTTTGGTAATGCTACCCGACCTGCAGACAACATGCTTGTTCAGGTTAGTAATAATTTCTACCCTATCCAGTCTGCTGTACCCAACGGTAGTGGGTGGGATGTGACTATTATCCGCCCAGATACTACTGACCGTACCCAAAACCTTGGTCTTAATGGTATTGTTGCTCTCGGTTCGTCTGCTTTCTTTTACCTTCGGTCTATGATCGCTTCTAGCGGTCACACGATGGAGTATGTGGGTGCTGGTACTGACTACCGTGCACTTCCTTACAACGCAACTGGTACTTATACTGTTGGTTCTGGTACTCAGCCTAATGGTGTTCCTATTGAAGCACATCAGGTTAAAGAACTAGACAACGGTAAAGTTTGGGCAGCTATTACTGATCACAACGGTAAGTTCCGTGTGGGTGATACTTTTAGTGTTAACCAGCAAACTGGTTTCGTCAGCATTCCGGCAGGTGCATTGTCTGTCAGCACCTTGCTGGAAGACCTGGATGTTAACGGCAAAGAGATTAAAACTGACACTACCAACCAAGACATCGTTCTTAACCCGAATGGTACTGGTGTAGTTAACGTTAGCACCAGTAAAATTACTAACGTTGTTGACCCTACCGATGCTCAGGATGCAGCAACCAAGAATTTTGTTGACAACCTTACCACGTCAAGCACTACTGAGCTGAACATCCTTGATGGTGCAACGCTTAATACCAGTGAGTTAAACATTCTTGACGGTGCAACTCTTGACACTAATGAGCTAAACCAGCTTGATGGTGCGTCACTGACTGATAATCCTACTTGGACTTCTACTACTCAGTTCCCCAGTGCTGCATCTATCAACACCCGTTTCCTTGGGTTGTTGAATGCTCTTGGTGGTTTTGTTGCTATTGCTGACGAGAACAGCTTCCCGAACGGCAACCCTGATCCTTCGGACGGTGCTGGCACTGTTGTGTCTATTGCCGATGCTGGTGGCATGTCCGTCAATGCAAGCGGTGAAGGTACTGGTCAAACCACTGGTGGTGATACTGTTACCATTACTGGTTTCCCAGCTAGCTTCAACAGCTCTACGCTTCCTGCACAACAGGGTCTGCAAGTTCAGACTACCACTACTCTTAATACCTACACCTACCACAAGGTTATCGCCCGTGATGACGATATTGTTCGTCTAAACGATGACGTTAACGACTTCTTTCAACGCTATCGTTTTGGTGCCTCTAACCCTACTACTGACAACGATGCTGGTGACCTGTTCTTTAACACGGGTTCTGGCACGATGCTGGTGTGGGATACTTCTGGTGCTACTAACGAGTGGAAAGAAGTTCAGTCTATTGGTGAGTTTTTTGTCATTCCTACTAGCGAGTTCCCGACGTGGAATGGTACTATTAATGACATCACTATTACCAATGCACCGACTAATGCTTCCCAGATTATTCTGTCTATTAACGGTGTAGTCCAGGAACCTAACACGGGTACTGCACGTCCTACTGACGGTTTTGCTCTTGATGGTTCTGTCATTCGACTGTCTGATGCACCTGCTACTGGTTCAGAAGCTTGGGGTGTAATCATTGGTTCTACCGTCAACATTGGTGAACCCAGTGCAAACACGGTGAGCACTGATAAGATTGTTGATGGTGCTGTTACGACAGCTAAACTTGGTTCAGGTGCAGTCACCGCTGACAAGCTGGCTGACACCGCTGTAACCGCTGGTAGCTACACGCTGTCCAGCATCACGGTTGACGCCCAGGGACGTATTACTGCTGCTTCTAGCGGTACTGCTGCTGACCCTGACATCATCACCGAAGGCAACACCAGCGTTGAAGTTGTTGACACTGGTTCTAACGGTGAGGTTCGGCTAACGACCGAAGGCACCCGTGCAATGACGATTGACTCGTCGCAGCGTGCAGGTCTGGGGACCAGTAGCCCCACTGCGCCGATGCACGTCAAAAAAGCAGATACAAGCACGTCAGGACTAGTTGATGGGATTAGGCTGCAACAAGGATCTGCAACTAACAGCAACAGGCTTTCTCTCACTTTCGGCTCTTTAGATAATTTTACTGTTGCTGGCGTAAACGGCGTAATTGAAACTCATTCAGGGACAGAATCAAATAATGTAGGCAGATTAGAGTTCTACACAAAAGCAAACGGAAGCTCCATCACCGAACGCATGAGGATTGACTCCTCAGGCAACGTAGGGATTGGCACCACGAGTCCTGATCACGGCAAATTAACCTTATTTGACTCTGCCTCTGCTGCTTTTAATGCGCTAGTTATTCAGCAAGGAAACACTGGAAGTACTGTTTCTGATGGTCTTCATGTTGGCATTGATAGTAACGTTGACGCATATATTACGCACAAAGAAAATAGAGCACTTGCATTTGGAACTGCTAACACAGAACGCCTCCGCATCCTTGCTGGTGGCGGTCTAACCTTCAACGGCGACACGGCTACTGCTAACGCGCTGGATGATTATGAGGAGGGGACTTGGACTCCAGAGCTTGCAGATGCAGTATCTGGAGGCAACACCGTAACTCACGCCGTGCAAGATGGAAAATATACTAAAGTCGGCAATATAGTCACCTGCTATTTTAGGATTACTTGGAGCAGCAAAGGATCATGCGCAGACAGTAGCCTTTTGAGAGTGCGCAACTTCCCTTTTACCAGCCTTAGCAATAGTGGTCAATTCTATTACACAGGGGCAATAACCCCCTTGGATGGACCTACGACTCTAGCTATGGCAGGCAACGGAACTGACAGCATTTTGTACGACGATAACAATCCCAATACGCTTCAAAGGTTTTCAAATATACCGTCGTCAAACACTGGTGGCGGCATTAATGGCTGCATAACCTATCAAGCTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88f94d0a3a69902a5d6fc7e22a30ade776ad73c7afa239556b6fcd71426b4e72
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage KBS-P-1A Henn,M.R., Lennon,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank