Protein

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Genbank accession
YP_009845875.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MESFANVDVNYPDGQTNKTVVPAEIQARGFKPPVRSTDGTLEPGSNLAANHLNYILNDIYNQLQAVNLVTESGGDNINGYRKFRDGTVEAWGAGKLVNGDLNVTLPTTFPEVPADIMTTIGGTNFGNNVDVVAALSATTTTIAFRGRYVPVAGGAGGPSGANFSWRAAYHPTVAKK
Physico‐chemical
properties
protein length:176 AA
molecular weight: 18558,41370 Da
isoelectric point:5,61020
aromaticity:0,08523
hydropathy:-0,23580

Domains

Domains [InterPro]
DC_0184
STR
5–168
DC_0184
G3DSA:2.60.40.3940
RBD
75–168
G3DSA:2.60.40.3940
YP_009845875.1
1 176
Architecture
STR
STR 5-168 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagM_AAM37
[NCBI] 		2588093 Uroviricota > Caudoviricetes > Dibbivirus >
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009845875.1 [NCBI]
Genbank nucleotide accession
NC_048766 [NCBI]
CDS location
range 21820 -> 22350
strand +
CDS
GTGGAATCTTTCGCTAATGTAGATGTTAACTATCCAGACGGCCAGACCAATAAAACGGTAGTGCCAGCCGAAATCCAGGCCAGAGGGTTTAAGCCGCCAGTGCGTTCTACAGATGGCACGCTTGAGCCTGGCAGCAACCTCGCAGCAAACCATCTAAACTACATCCTGAACGATATTTACAATCAGTTGCAGGCCGTTAATCTGGTGACTGAAAGCGGCGGCGACAACATCAACGGTTATCGCAAGTTCCGCGATGGAACCGTTGAGGCGTGGGGCGCTGGAAAGCTGGTTAACGGTGATCTAAACGTAACGCTGCCAACCACATTCCCGGAAGTACCCGCCGACATCATGACAACGATTGGCGGGACGAATTTCGGCAACAATGTGGACGTGGTGGCGGCATTATCAGCAACCACAACGACAATCGCGTTTCGAGGTCGTTACGTCCCGGTCGCTGGAGGCGCTGGCGGGCCTTCTGGTGCTAACTTCTCATGGCGTGCGGCATACCATCCAACAGTGGCTAAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a0e0185729c471e44d1bb5a31091cb9554730703a3b0eec42cdd6a1fc84bba3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7014
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea sp. infecting bacteriophage vB_PagM_AAM37 Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2012-05 — GenBank